RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ANAPC5Q9UJX4 755 aa8.65□□□□□ -1.02
ATXN3-235ENST00000556082 DNPEPQ9ULA0 475 aa8.65□□□□□ -1.02
ATXN3-235ENST00000556082 ZNF148Q9UQR1 794 aa8.65□□□□□ -1.02
ATXN3-235ENST00000556082 ATP8A1Q9Y2Q0 1164 aa8.65□□□□□ -1.02
ATXN3-235ENST00000556082 PDCD11Q14690 1871 aaKnown RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 C1QTNF9BB2RNN3 333 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 M0QZQ0 153 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 HCRTO43612 131 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 CST8O60676 142 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 SHOX2O60902 331 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 FKTNO75072 461 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 TCEA3O75764 348 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 ODC1P11926 461 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 CKBP12277 381 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 TYMPP19971 482 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 IL4RP24394 825 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 ADORA2BP29275 332 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 TKTP29401 623 aaKnown RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 MATKP42679 507 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 CDK7P50613 346 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 SCNN1GP51170 649 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 AFF1P51825 1210 aaKnown RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 HDAC4P56524 1084 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 DMTNQ08495 405 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 ADCY1Q08828 1119 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 DPYSL3Q14195 570 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 MORF4L2Q15014 288 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 LLGL1Q15334 1064 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 TAF5Q15542 800 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 HIF1AQ16665 826 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 CCDC142Q17RM4 750 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 SLC25A52Q3SY17 297 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 TIGD5Q53EQ6 642 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 TTMPQ5BVD1 217 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 KCNT1Q5JUK3 1230 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 CEP85LQ5SZL2 805 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 SH3PXD2AQ5TCZ1 1133 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 KAZNQ674X7 775 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 DENND2CQ68D51 928 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 SLC9A4Q6AI14 798 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 FAM171BQ6P995 826 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 CD300LGQ6UXG3 332 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 DSTYKQ6XUX3 929 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 SLC24A5Q71RS6 500 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 GSTA5Q7RTV2 222 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 PCGF5Q86SE9 256 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 SYT9Q86SS6 491 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 HOOK3Q86VS8 718 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 SCML4Q8N228 414 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 ZCCHC9Q8N567 271 aaKnown RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 MYCBPAPQ8TBZ2 947 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 ACTL9Q8TC94 416 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 FAM172AQ8WUF8 416 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 UBLCP1Q8WVY7 318 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 LPPQ93052 612 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 PGM2Q96G03 612 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 PIWIL1Q96J94 861 aaKnown RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 CCDC114Q96M63 670 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 RNF157Q96PX1 679 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 PEBP4Q96S96 227 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 LPIN3Q9BQK8 851 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 ACBD6Q9BR61 282 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 ZNF670Q9BS34 389 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 FTHL17Q9BXU8 183 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 MAK16Q9BXY0 300 aaKnown RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 B3GNT5Q9BYG0 378 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 OSBPL7Q9BZF2 842 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 ROPN1BQ9BZX4 212 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 ADAM7Q9H2U9 754 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 SEMA4AQ9H3S1 761 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 ROPN1Q9HAT0 212 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 CRTAC1Q9NQ79 661 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 KLHL11Q9NVR0 708 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 DDX43Q9NXZ2 648 aaKnown RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 RCOR3Q9P2K3 495 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 KANSL3Q9P2N6 904 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 PCSK1NQ9UHG2 260 aa8.64□□□□□ -1.03
ATXN3-235ENST00000556082 TPX2Q9ULW0 747 aaKnown RBP8.64□□□□□ -1.03
ATXN3-235ENST00000556082 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 CFAP69A5D8W1 941 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 SRRM3A6NNA2 597 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 C9IYK1 514 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 TMEM189-UBE2V1I3L0A0 370 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 ARVCFO00192 962 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 DNALI1O14645 258 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 RIPK2O43353 540 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 ATP2C2O75185 946 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 DAB1O75553 588 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 TTC4O95801 387 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 FAM200BP0CF97 657 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 ZFXP17010 805 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 TGM2P21980 687 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 NR2C2P49116 596 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 ITGA8P53708 1063 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 CDH6P55285 790 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 YWHAZP63104 245 aaKnown RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 MRPS5P82675 430 aaKnown RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 OTUD4Q01804 1114 aaKnown RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 SLC29A2Q14542 456 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms