RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 BEST2Q8NFU1 509 aa16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 PPP1R14CQ8TAE6 165 aa16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 GSDMBQ8TAX9 411 aa16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 RTP4Q96DX8 246 aa16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 PTCD3Q96EY7 689 aaKnown RBP16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 EBNA1BP2Q99848 306 aaKnown RBP16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 PNPLA8Q9NP80 782 aa16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 DTLQ9NZJ0 730 aa16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 CREB3O43889 395 aa16.21■□□□□ 0.18
ARHGEF40-203ENST00000554514 VAV1P15498 845 aa16.21■□□□□ 0.18
ARHGEF40-203ENST00000554514 PRKCHP24723 683 aa16.21■□□□□ 0.18
ARHGEF40-203ENST00000554514 YY1P25490 414 aa16.21■□□□□ 0.18
ARHGEF40-203ENST00000554514 GMPRP36959 345 aa16.21■□□□□ 0.18
ARHGEF40-203ENST00000554514 PDCD7Q8N8D1 485 aaKnown RBP16.21■□□□□ 0.18
ARHGEF40-203ENST00000554514 DTX3LQ8TDB6 740 aa16.21■□□□□ 0.18
ARHGEF40-203ENST00000554514 SNX27Q96L92 541 aa16.21■□□□□ 0.18
ARHGEF40-203ENST00000554514 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.21■□□□□ 0.181e-7■■■■□ 20.5
ARHGEF40-203ENST00000554514 MTMR10Q9NXD2 777 aa16.21■□□□□ 0.18
ARHGEF40-203ENST00000554514 GNL1P36915 607 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 ALDH18A1P54886 795 aaKnown RBP16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 AQP5P55064 265 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 KDSRQ06136 332 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 OLIG2Q13516 323 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 KPNB1Q14974 876 aaKnown RBP16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 CCDC6Q16204 474 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 DPP9Q86TI2 863 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 RPAINQ86UA6 219 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 NME8Q8N427 588 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 GPRC5AQ8NFJ5 357 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 OR6J1Q8NGC5 347 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 RILPQ96NA2 401 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 C20orf27Q9GZN8 174 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 LNPEPQ9UIQ6 1025 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 HMX2A2RU54 273 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 H3BRJ5 948 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 CLDN5O00501 218 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 SPTLC1O15269 473 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 GSC2O15499 205 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 SMPD1P17405 629 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 ACAT1P24752 427 aaKnown RBP16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 SULT1E1P49888 294 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 BST2Q10589 180 aaKnown RBP16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 NME3Q13232 169 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 DCAF6Q58WW2 860 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 C9orf57Q5W0N0 161 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 NCBP2-AS2Q69YL0 99 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 C4orf50Q6ZRC1 276 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 TTC39CQ8N584 583 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 SGIP1Q9BQI5 828 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 SNX25Q9H3E2 840 aa16.2■□□□□ 0.18
ARHGEF40-203ENST00000554514 TRDMT1O14717 391 aaKnown RBP16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 UPP2O95045 317 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 GNAZP19086 355 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 PTDSS1P48651 473 aaKnown RBP16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 DPYSL2Q16555 572 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 ZNF792Q3KQV3 632 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 SLC27A1Q6PCB7 646 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 DEFB106AQ8N104 65 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 FBXO27Q8NI29 283 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 ATXN7L3BQ96GX2 97 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 TRAFD1O14545 582 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 MFSD11O43934 449 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 KRT36O76013 467 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 ARL4AP40617 200 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 ADIGQ0VDE8 80 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 NBPF20Q3BBV1 942 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 DCAF4L1Q3SXM0 396 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 FAM43BQ6ZT52 329 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 TP53INP2Q8IXH6 220 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 COLGALT1Q8NBJ5 622 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 MICAL1Q8TDZ2 1067 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 TFB1MQ8WVM0 346 aaKnown RBP16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 HTR3CQ8WXA8 447 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 MIEF2Q96C03 454 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 TAS2R1Q9NYW7 299 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 CACNG4Q9UBN1 327 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 PIN4Q9Y237 131 aaKnown RBP16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 PCDHA11Q9Y5I1 949 aa16.19■□□□□ 0.18
ARHGEF40-203ENST00000554514 GCATO75600 419 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 LYPLA1O75608 230 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 STAU1O95793 577 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 SNAI1O95863 264 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 PDHA1P08559 390 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 MGAT1P26572 445 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 RPL10AP62906 217 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 RCN1Q15293 331 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 FBXO47Q5MNV8 452 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 WASHC2DQ5SRD0 308 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 ATG16L1Q676U5 607 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 LENG1Q96BZ8 264 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 NAF1Q96HR8 494 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 QKIQ96PU8 341 aaKnown RBP eCLIP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 FRMD8Q9BZ67 464 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 GCOM2Q9BZD3 368 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 ZNF180Q9UJW8 692 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 B2RBV5 119 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 TGDSO95455 350 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 MMP3P08254 477 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms