RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ADAM21Q9UKJ8 722 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 PACSIN3Q9UKS6 424 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 CNPY2Q9Y2B0 182 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 C2CD2Q9Y426 696 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 PRKAB1Q9Y478 270 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 PPP2R3BQ9Y5P8 575 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 HEG1Q9ULI3 1381 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 COL4A1P02462 1669 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 MUC3AQ02505 3323 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 PIEZO1Q92508 2521 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 GOLGA6L7A0A1B0GV03 622 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 FAM170AA1A519 330 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 YDJCA8MPS7 323 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 HNRNPCL2B2RXH8 293 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 B4E1Z4 1266 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 APAF1O14727 1248 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 CASQ2O14958 399 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 HOXA3O43365 443 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 FIBPO43427 364 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 HNRNPCL1O60812 293 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 OPHN1O60890 802 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 BAIAP3O94812 1187 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 PRPF6O94906 941 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 SLU7O95391 586 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 YEATS4O95619 227 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 VIMP08670 466 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 GAAP10253 952 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 PCP11498 1178 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 POLR2EP19388 210 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 CNGA1P29973 690 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 PSMC4P43686 418 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 BLVRAP53004 296 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 POLR2FP61218 127 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 FAM189BP81408 668 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 STK3Q13188 491 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 SP140Q13342 867 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 PLCB4Q15147 1175 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 PTPAQ15257 358 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 SF3B3Q15393 1217 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 TMEM95Q3KNT9 176 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 DCAF17Q5H9S7 520 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 TSHZ3Q63HK5 1081 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 GALNT17Q6IS24 598 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 NEPROQ6NW34 567 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 DSTYKQ6XUX3 929 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 CCDC121Q6ZUS5 278 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 MOB2Q70IA6 237 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 INTS8Q75QN2 995 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 SPARTQ8N0X7 666 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 TMCO5AQ8N6Q1 288 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 TRIML2Q8N7C3 387 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 CEP112Q8N8E3 955 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 SPERTQ8NA61 448 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 BEND2Q8NDZ0 799 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 KLHDC4Q8TBB5 520 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 NTN5Q8WTR8 489 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 RSAD2Q8WXG1 361 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 ZNF653Q96CK0 615 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 CLMNQ96JQ2 1002 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 TSC22D3Q99576 134 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 HTATIP2Q9BUP3 242 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 CPEB1Q9BZB8 566 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 PLEKHA5Q9HAU0 1116 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 CABP5Q9NP86 173 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 RIC8AQ9NPQ8 531 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 GPR108Q9NPR9 543 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 B4GALT6Q9UBX8 382 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 FBXL5Q9UKA1 691 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 R3HDM2Q9Y2K5 976 aaKnown RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 SH3GLB1Q9Y371 365 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 NR2E3Q9Y5X4 410 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 ECM29Q5VYK3 1845 aa4.71□□□□□ -1.66
ATXN3-227ENST00000554491 ASTN2O75129 1339 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-227ENST00000554491 COL2A1P02458 1487 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 ARPC4-TTLL3A0A0A6YYG9 625 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 HTR3EA5X5Y0 456 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 LRRIQ3A6PVS8 624 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 AHRRA9YTQ3 701 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 CBX4O00257 560 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 TEX28O15482 410 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 MTSS1O43312 755 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 KCNJ13O60928 360 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 RHOBTB3O94955 611 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 FSBPO95073 299 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 ASLP04424 464 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 SLC16A2P36021 539 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 POLD2P49005 469 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 B2MP61769 119 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 BYSLQ13895 437 aaKnown RBP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 SPCS2Q15005 226 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 BCL2A1Q16548 175 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 CCDC142Q17RM4 750 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 CEP85LQ5SZL2 805 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 FCRLBQ6BAA4 426 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 KIAA1841Q6NSI8 718 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 JAZF1Q86VZ6 243 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 TTC5Q8N0Z6 440 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 VPS52Q8N1B4 723 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 C7orf31Q8N865 590 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 USP38Q8NB14 1042 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms