RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ZNF473Q8WTR7 871 aaKnown RBP11.93□□□□□ -0.5
RAB5C-208ENST00000551338 IRGQQ8WZA9 623 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 PGAP3Q96FM1 320 aaPredicted RBP11.93□□□□□ -0.5
RAB5C-208ENST00000551338 VPS37BQ9H9H4 285 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 PRDM16Q9HAZ2 1276 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 DMAP1Q9NPF5 467 aaPredicted RBP11.93□□□□□ -0.5
RAB5C-208ENST00000551338 ANLNQ9NQW6 1124 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 ARHGEF4Q9NR80 690 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 DTLQ9NZJ0 730 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 COX16Q9P0S2 106 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 SF3B1O75533 1304 aaKnown RBP eCLIP11.92□□□□□ -0.5
RAB5C-208ENST00000551338 EXOC1LA0A1B0GW35 172 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 ARHGEF37A1IGU5 675 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 I6L893 689 aaPredicted RBP11.92□□□□□ -0.5
RAB5C-208ENST00000551338 DCLK1O15075 740 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 FKTNO75072 461 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 AMHP03971 560 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 TSHRP16473 764 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 SSTR1P30872 391 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 GRK4P32298 578 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 NME3Q13232 169 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 DPYSQ14117 519 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 GPNMBQ14956 572 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 EFTUD2Q15029 972 aaKnown RBP eCLIP11.92□□□□□ -0.52e-6■■■■■ 36.6
RAB5C-208ENST00000551338 TMED2Q15363 201 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 BBS9Q3SYG4 887 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 NOMO2Q5JPE7 1267 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 PM20D1Q6GTS8 502 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 PPP1R21Q6ZMI0 780 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 LRRC8DQ7L1W4 858 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 THEM5Q8N1Q8 247 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 CCDC33Q8N5R6 958 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 FBXO36Q8NEA4 188 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 CCDC110Q8TBZ0 833 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 ADAM32Q8TC27 787 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 URGCPQ8TCY9 931 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 MAML1Q92585 1016 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 SLC9A7Q96T83 725 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 CCDC77Q9BR77 488 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.92□□□□□ -0.5
RAB5C-208ENST00000551338 PNPLA8Q9NP80 782 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 PPANQ9NQ55 473 aaKnown RBP11.92□□□□□ -0.5
RAB5C-208ENST00000551338 RAB6BQ9NRW1 208 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 TBC1D13Q9NVG8 400 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 RRN3Q9NYV6 651 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 CHMP2BQ9UQN3 213 aa11.92□□□□□ -0.5
RAB5C-208ENST00000551338 LTBP2Q14767 1821 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 GMNCA6NCL1 334 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 C5orf60A6NFR6 353 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 HACD1B0YJ81 288 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 POC1B-GALNT4F8VUJ3 575 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 EEF2KO00418 725 aaKnown RBP11.91□□□□□ -0.5
RAB5C-208ENST00000551338 NDUFAB1O14561 156 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 CAPN9O14815 690 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 GCATO75600 419 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 NCAM1P13591 858 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 SELPP16109 830 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 ADRA1BP35368 520 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 MAP2K2P36507 400 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 VEGFBP49765 207 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 CDK7P50613 346 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 AIF1P55008 147 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 PRMT2P55345 433 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 TSPY1Q01534 308 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 PAFAH1B3Q15102 231 aaKnown RBP11.91□□□□□ -0.5
RAB5C-208ENST00000551338 PRKD1Q15139 912 aaPredicted RBP11.91□□□□□ -0.5
RAB5C-208ENST00000551338 MAPRE1Q15691 268 aaKnown RBP11.91□□□□□ -0.5
RAB5C-208ENST00000551338 ZNF534Q76KX8 674 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 IGDCC3Q8IVU1 814 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 FAM126BQ8IXS8 530 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 PDIK1LQ8N165 341 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 AGGF1Q8N302 714 aaeCLIP11.91□□□□□ -0.5
RAB5C-208ENST00000551338 PYROXD1Q8WU10 500 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 ZNF296Q8WUU4 475 aaPredicted RBP11.91□□□□□ -0.5
RAB5C-208ENST00000551338 CCT8L2Q96SF2 557 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 CCDC134Q9H6E4 229 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 PPCSQ9HAB8 311 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 ETNK1Q9HBU6 452 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 TMEM161AQ9NX61 479 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 TBK1Q9UHD2 729 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 RSPH14Q9UHP6 348 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 ACTL7BQ9Y614 415 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 TEX264Q9Y6I9 313 aa11.91□□□□□ -0.5
RAB5C-208ENST00000551338 KIAA1671Q9BY89 1806 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 MIA3Q5JRA6 1907 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 TMEM120BA0PK00 339 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 KBTBD13C9JR72 458 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 FAM72CH0Y354 149 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 CREB3O43889 395 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 NBNO60934 754 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 METTL18O95568 372 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 FAM107AO95990 144 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 OR4Q2P0C623 313 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 TPSB2P20231 275 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 DRD4P21917 467 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 PHBP35232 272 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 ELK3P41970 407 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 CXCR3P49682 368 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 MTM1Q13496 603 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms