RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 MFAP3P55082 362 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 GOLGA8FQ08AF8 430 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 GOLGA8DPQ0D2H9 430 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 DENND1BQ6P3S1 775 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 IRF2BP1Q8IU81 584 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 TTC39CQ8N584 583 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 WFDC5Q8TCV5 224 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 IPO4Q8TEX9 1081 aaKnown RBP16.65■□□□□ 0.26
COX6A1-203ENST00000550009 PIGKQ92643 395 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 PIWIL1Q96J94 861 aaKnown RBP16.65■□□□□ 0.26
COX6A1-203ENST00000550009 XPO6Q96QU8 1125 aaKnown RBP16.65■□□□□ 0.26
COX6A1-203ENST00000550009 POLMQ9NP87 494 aaPredicted RBP16.65■□□□□ 0.26
COX6A1-203ENST00000550009 HESX1Q9UBX0 185 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 CYTH4Q9UIA0 394 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 STARD13Q9Y3M8 1113 aa16.65■□□□□ 0.26
COX6A1-203ENST00000550009 FAM170AA1A519 330 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 GIPC1O14908 333 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 PMM2O15305 246 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 FYNP06241 537 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 SLC9A1P19634 815 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 TBXAS1P24557 533 aaPredicted RBP16.64■□□□□ 0.25
COX6A1-203ENST00000550009 IL12RB1P42701 662 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 IRX4P78413 519 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 COG7P83436 770 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 TRIP4Q15650 581 aaPredicted RBP16.64■□□□□ 0.25
COX6A1-203ENST00000550009 RFWD3Q6PCD5 774 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 CREBRFQ8IUR6 639 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 CHPFQ8IZ52 775 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 CCDC26Q8TAB7 109 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 KCTD13Q8WZ19 329 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 IPO9Q96P70 1041 aaKnown RBP16.64■□□□□ 0.25
COX6A1-203ENST00000550009 MIS12Q9H081 205 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 VPS45Q9NRW7 570 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 KIAA1468Q9P260 1216 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 PCDHGA5Q9Y5G8 931 aa16.64■□□□□ 0.25
COX6A1-203ENST00000550009 TPRP12270 2363 aaKnown RBP16.63■□□□□ 0.25
COX6A1-203ENST00000550009 GFRA2O00451 464 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 ALDH1A2O94788 518 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 AFPP02771 609 aaKnown RBP16.63■□□□□ 0.25
COX6A1-203ENST00000550009 PAEPP09466 180 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 ITPKAP23677 461 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 SLC6A4P31645 630 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 MARSP56192 900 aaKnown RBP16.63■□□□□ 0.25
COX6A1-203ENST00000550009 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
COX6A1-203ENST00000550009 HSF5Q4G112 596 aaPredicted RBP16.63■□□□□ 0.25
COX6A1-203ENST00000550009 CYP2U1Q7Z449 544 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 FAM217AQ8IXS0 508 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 GABRG3Q99928 467 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 EDEM2Q9BV94 578 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 CYP8B1Q9UNU6 501 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.63■□□□□ 0.25
COX6A1-203ENST00000550009 STON1Q9Y6Q2 735 aa16.63■□□□□ 0.25
COX6A1-203ENST00000550009 AKAP13Q12802 2813 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 IGHV1OR15-9A0A0B4J2B8 117 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 BICDL2A1A5D9 508 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 C4orf47A7E2U8 309 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 BECN2A8MW95 431 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 CDX4O14627 284 aaPredicted RBP16.62■□□□□ 0.25
COX6A1-203ENST00000550009 PNMA6AP0CW24 399 aaPredicted RBP16.62■□□□□ 0.25
COX6A1-203ENST00000550009 SETSIPP0DME0 302 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 KRT5P13647 590 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 PRKCHP24723 683 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 HOXD9P28356 352 aaPredicted RBP16.62■□□□□ 0.25
COX6A1-203ENST00000550009 PITX1P78337 314 aaPredicted RBP16.62■□□□□ 0.25
COX6A1-203ENST00000550009 CNGA2Q16280 664 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 HSP90AA4PQ58FG1 418 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 RNF43Q68DV7 783 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 NADSYN1Q6IA69 706 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 TADA2BQ86TJ2 420 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 CACUL1Q86Y37 369 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 SLC41A1Q8IVJ1 513 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 SIX6OS1Q8N1H7 587 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 ARHGAP18Q8N392 663 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 ZNF366Q8N895 744 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 ADAM32Q8TC27 787 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 DDI1Q8WTU0 396 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 CYB5D2Q8WUJ1 264 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 MRGPRX1Q96LB2 322 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 CNTNAP3BQ96NU0 1288 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 CNTNAP3Q9BZ76 1288 aa16.62■□□□□ 0.25
COX6A1-203ENST00000550009 UBE2TQ9NPD8 197 aaPredicted RBP16.62■□□□□ 0.25
COX6A1-203ENST00000550009 XPO7Q9UIA9 1087 aaKnown RBP16.62■□□□□ 0.25
COX6A1-203ENST00000550009 MAP1BP46821 2468 aaKnown RBP16.61■□□□□ 0.25
COX6A1-203ENST00000550009 CACNA1EQ15878 2313 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 MAP3K13O43283 966 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 HLA-EP13747 358 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 SDHBP21912 280 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 GPD2P43304 727 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 NUMBP49757 651 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 SLC8A3P57103 927 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 ZNF234Q14588 700 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 FUT11Q495W5 492 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 N4BP2L1Q5TBK1 243 aaPredicted RBP16.61■□□□□ 0.25
COX6A1-203ENST00000550009 SCUBE3Q8IX30 993 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 CPXM2Q8N436 756 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 OR2I1PQ8NGU4 316 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 PLD4Q96BZ4 506 aa16.61■□□□□ 0.25
COX6A1-203ENST00000550009 CDK5RAP1Q96SZ6 601 aaKnown RBP16.61■□□□□ 0.25
COX6A1-203ENST00000550009 GTPBP4Q9BZE4 634 aaKnown RBP16.61■□□□□ 0.25
COX6A1-203ENST00000550009 DCLK3Q9C098 648 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms