RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 TMIGD3P0DMS9 266 aaPredicted RBP4.63□□□□□ -1.67
MDM2-229ENST00000543046 EPHB2P29323 1055 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 CCDC173Q0VFZ6 552 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 UBE4AQ14139 1066 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 TMEM196Q5HYL7 178 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 DNTTIP2Q5QJE6 756 aaKnown RBP4.63□□□□□ -1.67
MDM2-229ENST00000543046 TLDC1Q6P9B6 456 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 VSTM1Q6UX27 236 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 MORC1Q86VD1 984 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 SYTL1Q8IYJ3 562 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 KAZALD1Q96I82 304 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 SEMA4CQ9C0C4 833 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 PRKRIP1Q9H875 184 aaPredicted RBP4.63□□□□□ -1.67
MDM2-229ENST00000543046 GRPEL1Q9HAV7 217 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 CDC23Q9UJX2 597 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 CA14Q9ULX7 337 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 CCDC144AA2RUR9 1427 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 SCAPERQ9BY12 1400 aa4.63□□□□□ -1.67
MDM2-229ENST00000543046 NCOA2Q15596 1464 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 EIF4G1Q04637 1599 aaKnown RBP4.62□□□□□ -1.67
MDM2-229ENST00000543046 KIF21BO75037 1637 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.62□□□□□ -1.67
MDM2-229ENST00000543046 PPP6CO00743 305 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 MBPP02686 304 aaPredicted RBP4.62□□□□□ -1.67
MDM2-229ENST00000543046 GALNSP34059 522 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 PPM1AP35813 382 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 TECP42680 631 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 HTR3AP46098 478 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 BFSP2Q13515 415 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 FAM90A2PQ658T7 463 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 ARL6IP4Q66PJ3 421 aaKnown RBP4.62□□□□□ -1.67
MDM2-229ENST00000543046 TOGARAM2Q6ZUX3 1019 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 SKAP1Q86WV1 359 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 RASGRP3Q8IV61 690 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 CLASRPQ8N2M8 674 aaKnown RBP4.62□□□□□ -1.67
MDM2-229ENST00000543046 PNISRQ8TF01 805 aaKnown RBP4.62□□□□□ -1.67
MDM2-229ENST00000543046 MUL1Q969V5 352 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 TMEM41AQ96HV5 264 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 SIN3AQ96ST3 1273 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 SH2D3AQ9BRG2 576 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 NUDT22Q9BRQ3 303 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 EFHD1Q9BUP0 239 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 ADGRE3Q9BY15 652 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 PDGFCQ9NRA1 345 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 VPS4AQ9UN37 437 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 DTNAQ9Y4J8 743 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 PCDHB2Q9Y5E7 798 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 SETD5Q9C0A6 1442 aa4.62□□□□□ -1.67
MDM2-229ENST00000543046 J3KTA2 159 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 DHHO43323 396 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 SETSIPP0DME0 302 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 MCCP23508 829 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 ABCG1P45844 678 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 GSTM5P46439 218 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 JAK3P52333 1124 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 RRP1P56182 461 aaKnown RBP4.61□□□□□ -1.67
MDM2-229ENST00000543046 RAE1P78406 368 aaKnown RBP4.61□□□□□ -1.67
MDM2-229ENST00000543046 SEMA3BQ13214 749 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 SLC14A1Q13336 389 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 STARD3Q14849 445 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 BRD3Q15059 726 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 EZH2Q15910 746 aaKnown RBP4.61□□□□□ -1.67
MDM2-229ENST00000543046 SRSF7Q16629 238 aaKnown RBP eCLIP4.61□□□□□ -1.671e-7■□□□□ 8.7
MDM2-229ENST00000543046 P3H1Q32P28 736 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 CC2D1BQ5T0F9 858 aaKnown RBP4.61□□□□□ -1.67
MDM2-229ENST00000543046 SLC18B1Q6NT16 456 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 CCDC144NLQ6NUI1 221 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 MIS18BP1Q6P0N0 1132 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 SASS6Q6UVJ0 657 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 RANBP10Q6VN20 620 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 ZNF813Q6ZN06 617 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 PIK3AP1Q6ZUJ8 805 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 YTHDF3Q7Z739 585 aaKnown RBP4.61□□□□□ -1.67
MDM2-229ENST00000543046 EXOC8Q8IYI6 725 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 GALNT16Q8N428 558 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 PMM1Q92871 262 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 SLC39A13Q96H72 371 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 HIC2Q96JB3 615 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 TTLL2Q9BWV7 592 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 QTRT1Q9BXR0 403 aaKnown RBP4.61□□□□□ -1.67
MDM2-229ENST00000543046 HELLSQ9NRZ9 838 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 RXFP3Q9NSD7 469 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 IGSF9Q9P2J2 1179 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 WDR17Q8IZU2 1322 aa4.61□□□□□ -1.67
MDM2-229ENST00000543046 TULP2O00295 520 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 PCDH17O14917 1159 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 PIP5K1BO14986 540 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 PEX14O75381 377 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 RNF8O76064 485 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 GLP2RO95838 553 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 PRR35P0CG20 571 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 MMP8P22894 467 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 KELP23276 732 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 IGHMBP2P38935 993 aaKnown RBP4.6□□□□□ -1.67
MDM2-229ENST00000543046 IL6STP40189 918 aaPredicted RBP4.6□□□□□ -1.67
MDM2-229ENST00000543046 RHBDL3P58872 404 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 WDR5P61964 334 aaKnown RBP4.6□□□□□ -1.67
MDM2-229ENST00000543046 SUPT20HL1Q3ZLR7 823 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 NEK8Q86SG6 692 aa4.6□□□□□ -1.67
MDM2-229ENST00000543046 TTC30AQ86WT1 665 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms