RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 BTBD19C9JJ37 291 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 POC1B-GALNT4F8VUJ3 575 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 J3KTA2 159 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 SKAP2O75563 359 aaPredicted RBP3.71□□□□□ -1.82
USP28-210ENST00000542033 USP1O94782 785 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 GLP2RO95838 553 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 CHRM5P08912 532 aaPredicted RBP3.71□□□□□ -1.82
USP28-210ENST00000542033 TMIGD3P0DMS9 266 aaPredicted RBP3.71□□□□□ -1.82
USP28-210ENST00000542033 CDK4P11802 303 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 APEHP13798 732 aaKnown RBP3.71□□□□□ -1.82
USP28-210ENST00000542033 HSD3B1P14060 373 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 ALDH18A1P54886 795 aaKnown RBP3.71□□□□□ -1.82
USP28-210ENST00000542033 PROK1P58294 105 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 TUBA4AP68366 448 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 CFHR3Q02985 330 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 MTAPQ13126 283 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 SEMA3BQ13214 749 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 FHL3Q13643 280 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 BLMHQ13867 455 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 CSHL1Q14406 222 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 KCNB1Q14721 858 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 MAPRE1Q15691 268 aaKnown RBP3.71□□□□□ -1.82
USP28-210ENST00000542033 FAM187BQ17R55 369 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 TUBB8Q3ZCM7 444 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 AASDHQ4L235 1098 aaPredicted RBP3.71□□□□□ -1.82
USP28-210ENST00000542033 TMEM196Q5HYL7 178 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 GRHL2Q6ISB3 625 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 VSTM1Q6UX27 236 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 LDHAL6AQ6ZMR3 332 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 DCDC5Q6ZRR9 648 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 GATAD2AQ86YP4 633 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 CNPY4Q8N129 248 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 GALNT4Q8N4A0 578 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 SEMA6DQ8NFY4 1073 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 MAFAQ8NHW3 353 aaPredicted RBP3.71□□□□□ -1.82
USP28-210ENST00000542033 ADAMTS18Q8TE60 1221 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 SECISBP2LQ93073 1101 aaKnown RBP3.71□□□□□ -1.82
USP28-210ENST00000542033 ZNF622Q969S3 477 aaKnown RBP eCLIP3.71□□□□□ -1.82
USP28-210ENST00000542033 ASB2Q96Q27 587 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 MYLK2Q9H1R3 596 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 EPS8L2Q9H6S3 715 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 FRMD4BQ9Y2L6 1034 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 DTNAQ9Y4J8 743 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 AOX1Q06278 1338 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.7□□□□□ -1.82
USP28-210ENST00000542033 TMEM232C9JQI7 657 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 RNF8O76064 485 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 MMP8P22894 467 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 ANP32AP39687 249 aaKnown RBP3.7□□□□□ -1.82
USP28-210ENST00000542033 MMP14P50281 582 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 GPC5P78333 572 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 DNASE1L3Q13609 305 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 KCNJ12Q14500 433 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 SPARCL1Q14515 664 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 MFSD13AQ14CX5 517 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 PUM3Q15397 648 aaKnown RBP3.7□□□□□ -1.82
USP28-210ENST00000542033 PROSER3Q2NL68 480 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 CCDC38Q502W7 563 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 COLEC12Q5KU26 742 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 CC2D1BQ5T0F9 858 aaKnown RBP3.7□□□□□ -1.82
USP28-210ENST00000542033 CLEC4GQ6UXB4 293 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 MMS22LQ6ZRQ5 1243 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 KRT27Q7Z3Y8 459 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 PCGF5Q86SE9 256 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 CHSY1Q86X52 802 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 ANKRD18AQ8IVF6 992 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 C16orf71Q8IYS4 520 aaPredicted RBP3.7□□□□□ -1.82
USP28-210ENST00000542033 CLASRPQ8N2M8 674 aaKnown RBP3.7□□□□□ -1.82
USP28-210ENST00000542033 OVCA2Q8WZ82 227 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 GCC1Q96CN9 775 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 EDC3Q96F86 508 aaKnown RBP3.7□□□□□ -1.82
USP28-210ENST00000542033 LTV1Q96GA3 475 aaPredicted RBP3.7□□□□□ -1.82
USP28-210ENST00000542033 TBATAQ96M53 351 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 ADGRE3Q9BY15 652 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 SEMA4CQ9C0C4 833 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 TMEM8AQ9HCN3 771 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 OBP2BQ9NPH6 170 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 ASIC5Q9NY37 505 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 FLRT1Q9NZU1 646 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 IGSF9Q9P2J2 1179 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 VPS4AQ9UN37 437 aa3.7□□□□□ -1.82
USP28-210ENST00000542033 POLR2AP24928 1970 aaKnown RBP3.7□□□□□ -1.82
USP28-210ENST00000542033 TCRBV5S1A1TA0A578 114 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 AQP12BA6NM10 295 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 TISP43B9A030 160 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 PRRT4C9JH25 899 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 CLIC1O00299 241 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 FYB1O15117 783 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 ASNA1O43681 348 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 PRAMEF2O60811 474 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 CBFA2T3O75081 653 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 NTSR2O95665 410 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 CSTBP04080 98 aaKnown RBP3.69□□□□□ -1.82
USP28-210ENST00000542033 SLC3A2P08195 630 aaKnown RBP3.69□□□□□ -1.82
USP28-210ENST00000542033 NPPBP16860 134 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 CERS1P27544 350 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 GALNSP34059 522 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 DDIT3P35638 169 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 JAK3P52333 1124 aa3.69□□□□□ -1.82
USP28-210ENST00000542033 TFF2Q03403 129 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms