RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 TTC39CQ8N584 583 aa25.15■■□□□ 1.62
LEMD3-203ENST00000541171 UCMAQ8WVF2 138 aa25.15■■□□□ 1.62
LEMD3-203ENST00000541171 NDRG1Q92597 394 aaKnown RBP25.15■■□□□ 1.62
LEMD3-203ENST00000541171 THAP10Q9P2Z0 257 aaPredicted RBP25.15■■□□□ 1.62
LEMD3-203ENST00000541171 PCNX2A6NKB5 2137 aa25.14■■□□□ 1.62
LEMD3-203ENST00000541171 ZNF202O95125 648 aa25.14■■□□□ 1.62
LEMD3-203ENST00000541171 EPB41P11171 864 aaKnown RBP25.14■■□□□ 1.62
LEMD3-203ENST00000541171 TKTL1P51854 596 aa25.14■■□□□ 1.62
LEMD3-203ENST00000541171 SLC8A3P57103 927 aa25.14■■□□□ 1.62
LEMD3-203ENST00000541171 FAM193AP78312 1265 aa25.14■■□□□ 1.62
LEMD3-203ENST00000541171 KDF1Q8NAX2 398 aaPredicted RBP25.14■■□□□ 1.62
LEMD3-203ENST00000541171 DDI1Q8WTU0 396 aa25.14■■□□□ 1.62
LEMD3-203ENST00000541171 FOXJ1Q92949 421 aa25.14■■□□□ 1.62
LEMD3-203ENST00000541171 TOE1Q96GM8 510 aaKnown RBP25.14■■□□□ 1.62
LEMD3-203ENST00000541171 UBXN6Q9BZV1 441 aa25.14■■□□□ 1.62
LEMD3-203ENST00000541171 MKRN2Q9H000 416 aaKnown RBP25.14■■□□□ 1.62
LEMD3-203ENST00000541171 FAM124BQ9H5Z6 455 aaPredicted RBP25.14■■□□□ 1.62
LEMD3-203ENST00000541171 CLEC4EQ9ULY5 219 aa25.14■■□□□ 1.62
LEMD3-203ENST00000541171 CETN3O15182 167 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 STX10O60499 249 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 SYNCRIPO60506 623 aaKnown RBP25.13■■□□□ 1.61
LEMD3-203ENST00000541171 GNSP15586 552 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 GOLGA7BQ2TAP0 167 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 EDRF1Q3B7T1 1238 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 RAB41Q5JT25 222 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 WDR45BQ5MNZ6 344 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 TCERG1LQ5VWI1 586 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 ARHGAP17Q68EM7 881 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 ANKS1BQ7Z6G8 1248 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 ANKRD52Q8NB46 1076 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 GATA6Q92908 595 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 GPR174Q9BXC1 333 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 ULBP1Q9BZM6 244 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 CIPCQ9C0C6 399 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 SUSD2Q9UGT4 822 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 KLK13Q9UKR3 277 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 IGF2RP11717 2491 aa25.13■■□□□ 1.61
LEMD3-203ENST00000541171 A0A1W2PQ27 194 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 A0A1W2PQ64 194 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 MEI4A8MW99 385 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 TULP2O00295 520 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 ZBED1O96006 694 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 CD59P13987 128 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 DCAF17Q5H9S7 520 aaPredicted RBP25.12■■□□□ 1.61
LEMD3-203ENST00000541171 CACUL1Q86Y37 369 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 TMPRSS6Q8IU80 811 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 SORCS1Q8WY21 1168 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 FAXDC2Q96IV6 333 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 PIWIL1Q96J94 861 aaKnown RBP25.12■■□□□ 1.61
LEMD3-203ENST00000541171 CAMK1GQ96NX5 476 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 SCAND2PQ9GZW5 306 aaPredicted RBP25.12■■□□□ 1.61
LEMD3-203ENST00000541171 ITM2CQ9NQX7 267 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 DNAAF2Q9NVR5 837 aaKnown RBP25.12■■□□□ 1.61
LEMD3-203ENST00000541171 ELOVL2Q9NXB9 296 aa25.12■■□□□ 1.61
LEMD3-203ENST00000541171 WSB2Q9NYS7 404 aaPredicted RBP25.12■■□□□ 1.61
LEMD3-203ENST00000541171 PCDH15Q96QU1 1955 aa25.11■■□□□ 1.61
LEMD3-203ENST00000541171 KCNJ18B7U540 433 aa25.11■■□□□ 1.61
LEMD3-203ENST00000541171 NPC1O15118 1278 aa25.11■■□□□ 1.61
LEMD3-203ENST00000541171 NCAM1P13591 858 aa25.11■■□□□ 1.61
LEMD3-203ENST00000541171 RDXP35241 583 aaKnown RBP25.11■■□□□ 1.61
LEMD3-203ENST00000541171 ZNF234Q14588 700 aa25.11■■□□□ 1.61
LEMD3-203ENST00000541171 METTL3Q86U44 580 aaKnown RBP25.11■■□□□ 1.61
LEMD3-203ENST00000541171 SIPA1Q96FS4 1042 aa25.11■■□□□ 1.61
LEMD3-203ENST00000541171 MIR1-1HGQ9H1L0 117 aa25.11■■□□□ 1.61
LEMD3-203ENST00000541171 GDPD2Q9HCC8 539 aa25.11■■□□□ 1.61
LEMD3-203ENST00000541171 USP36Q9P275 1121 aaKnown RBP25.11■■□□□ 1.61
LEMD3-203ENST00000541171 NEUROG3Q9Y4Z2 214 aa25.11■■□□□ 1.61
LEMD3-203ENST00000541171 SH3BP5O60239 455 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 TSPAN3O60637 253 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 MCCD1P59942 119 aaPredicted RBP25.1■■□□□ 1.61
LEMD3-203ENST00000541171 ARID5AQ03989 594 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 PDE4CQ08493 712 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 CBWD6Q4V339 395 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 CBWD3Q5JTY5 395 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 CBWD5Q5RIA9 395 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 FMNL3Q8IVF7 1028 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 CPXM2Q8N436 756 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 PRCCQ92733 491 aaPredicted RBP25.1■■□□□ 1.61
LEMD3-203ENST00000541171 PLD4Q96BZ4 506 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 LRRC4Q9HBW1 653 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 TSPAN16Q9UKR8 245 aa25.1■■□□□ 1.61
LEMD3-203ENST00000541171 TMEM8BA6NDV4 472 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 EPHX1P07099 455 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 CD19P15391 556 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 PRKCHP24723 683 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 TPMTP51580 245 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 ZNF132P52740 706 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 PNOCQ13519 176 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 ENPP2Q13822 863 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 SGO2Q562F6 1265 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 PM20D1Q6GTS8 502 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 CHCHD4Q8N4Q1 142 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 ZCCHC9Q8N567 271 aaKnown RBP25.09■■□□□ 1.61
LEMD3-203ENST00000541171 UBA3Q8TBC4 463 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 RNF139Q8WU17 664 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 EDEM1Q92611 657 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 HESX1Q9UBX0 185 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 SFMBT1Q9UHJ3 866 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 MSRB2Q9Y3D2 182 aa25.09■■□□□ 1.61
LEMD3-203ENST00000541171 PCDHB9Q9Y5E1 797 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms