RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 GIPC1O14908 333 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 POLR2DO15514 142 aaKnown RBP9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 TGFB1I1O43294 461 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 COCHO43405 550 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 YEATS4O95619 227 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 HSP90AA1P07900 732 aaKnown RBP9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 HOXB2P14652 356 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 AFMP43652 599 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 MAPK8P45983 427 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 TUBP50607 506 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 SLC5A3P53794 718 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 MCCD1P59942 119 aaPredicted RBP9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 KNOP1Q1ED39 458 aaKnown RBP9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 DUOXA1Q1HG43 343 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 C10orf76Q5T2E6 689 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 EMC10Q5UCC4 262 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 GRAMD4Q6IC98 578 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 CNNM4Q6P4Q7 775 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 UNQ6494/PRO21346Q6UXR6 183 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 SCARA5Q6ZMJ2 495 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 EPM2AIP1Q7L775 607 aaPredicted RBP9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 C12orf40Q86WS4 652 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 CEP57L1Q8IYX8 460 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 DEFB124Q8NES8 71 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 OLIG1Q8TAK6 271 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 CEP76Q8TAP6 659 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 SCFD1Q8WVM8 642 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 SMYD3Q9H7B4 428 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 SLC39A2Q9NP94 309 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 TLR8Q9NR97 1041 aaKnown RBP9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 SPHK2Q9NRA0 654 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 KRT82Q9NSB4 513 aa9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 LSM7Q9UK45 103 aaKnown RBP9.54□□□□□ -0.88
CCDC144NL-203ENST00000539484 A0A0A0MRY4 1105 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 PVALEFA0A1B0GWK0 134 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 CDX4O14627 284 aaPredicted RBP9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 ZNF217O75362 1048 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 PDIA4P13667 645 aaKnown RBP9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 NTSR1P30989 418 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 HOXD13P35453 343 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 KIR2DL1P43626 348 aaPredicted RBP9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 CACNA2D1P54289 1103 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 CDH8P55286 799 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 RPL6Q02878 288 aaKnown RBP9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 GFPT1Q06210 699 aaPredicted RBP9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 NCOA4Q13772 614 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 SLC23A3Q6PIS1 610 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 ACOT1Q86TX2 421 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 C12orf56Q8IXR9 622 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 TERB1Q8NA31 727 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 SCAMP5Q8TAC9 235 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 RHBDD1Q8TEB9 315 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 KCNK16Q96T55 309 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 GTPBP2Q9BX10 602 aaKnown RBP9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 BBS2Q9BXC9 721 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 IMPG2Q9BZV3 1241 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 BLZF1Q9H2G9 400 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 CCSER2Q9H7U1 834 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 ZDHHC4Q9NPG8 344 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 EXOC1Q9NV70 894 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 DNAJC17Q9NVM6 304 aaKnown RBP9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 DNAAF2Q9NVR5 837 aaKnown RBP9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 GMIPQ9P107 970 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 NME7Q9Y5B8 376 aa9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 ATXN2Q99700 1313 aaKnown RBP9.53□□□□□ -0.88
CCDC144NL-203ENST00000539484 TMEM8BA6NDV4 472 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 ANTXRLA6NF34 631 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 NEDD8-MDP1E9PL57 170 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 ATXN7O15265 892 aaPredicted RBP9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 HOXC11O43248 304 aaPredicted RBP9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 TLR5O60602 858 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 OPHN1O60890 802 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 NDUFS2O75306 463 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 TULP3O75386 442 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 RPN1P04843 607 aaKnown RBP9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 SYPP08247 313 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 C1QTNF9P0C862 333 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 HNRNPLP14866 589 aaKnown RBP eCLIP9.52□□□□□ -0.893e-15■■■□□ 18.5
CCDC144NL-203ENST00000539484 ENGP17813 658 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 HOXD12P35452 270 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 ATP5C1P36542 298 aaKnown RBP9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 PIK3CAP42336 1068 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 WASP42768 502 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 PTGER3P43115 390 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 ME1P48163 572 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 MAP3K7CLP57077 242 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 CACNA1EQ15878 2313 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 SGSM1Q2NKQ1 1148 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 SNX30Q5VWJ9 437 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 SHC4Q6S5L8 630 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 SFTPA1Q8IWL2 248 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 BBS7Q8IWZ6 715 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 CHPFQ8IZ52 775 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 RGL4Q8IZJ4 473 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 PARD3BQ8TEW8 1205 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 FOXD4L4Q8WXT5 416 aaPredicted RBP9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 XYLT2Q9H1B5 865 aa9.52□□□□□ -0.89
CCDC144NL-203ENST00000539484 TMEM30AQ9NV96 361 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms