RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PIK3AP1Q6ZUJ8 805 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 WDR36Q8NI36 951 aaKnown RBP10.06□□□□□ -0.8
CPSF7-217ENST00000537162 IFI44Q8TCB0 444 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 KIFAP3Q92845 792 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 SKA1Q96BD8 255 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 ACBD6Q9BR61 282 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 SLC12A9Q9BXP2 914 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 CCSER2Q9H7U1 834 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 TMEM30AQ9NV96 361 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 CUEDC1Q9NWM3 386 aaPredicted RBP10.06□□□□□ -0.8
CPSF7-217ENST00000537162 MARK1Q9P0L2 795 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 ABCA2Q9BZC7 2435 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 KPNA7A9QM74 516 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 C10orf142B7Z368 130 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 CCER2I3L3R5 266 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 CLDN3O15551 220 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 GP1BAP07359 652 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 C7P10643 843 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 LIPCP11150 499 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 IFNAR1P17181 557 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 DGKAP23743 735 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 PAX3P23760 479 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 MAGEA11P43364 429 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 CACNA2D1P54289 1103 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 MFAP3P55082 362 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 NUCB1Q02818 461 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 IFRD2Q12894 506 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-217ENST00000537162 ZFAND4Q86XD8 727 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 JAMLQ86YT9 394 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 SMC5Q8IY18 1101 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 C9orf43Q8TAL5 461 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-217ENST00000537162 PDCD6IPQ8WUM4 868 aaKnown RBP10.05□□□□□ -0.8
CPSF7-217ENST00000537162 DUSP9Q99956 384 aaKnown RBP10.05□□□□□ -0.8
CPSF7-217ENST00000537162 SGK2Q9HBY8 427 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 KMT5AQ9NQR1 393 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 WDR35Q9P2L0 1181 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 TUBD1Q9UJT1 453 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 CLEC4EQ9ULY5 219 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 SVILO95425 2214 aa10.05□□□□□ -0.8
CPSF7-217ENST00000537162 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
CPSF7-217ENST00000537162 HGFP14210 728 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 NR1D1P20393 614 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 MLLT3P42568 568 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-217ENST00000537162 MATR3P43243 847 aaKnown RBP eCLIP10.04□□□□□ -0.8
CPSF7-217ENST00000537162 PGFP49763 221 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 PSMC1P62191 440 aaKnown RBP10.04□□□□□ -0.8
CPSF7-217ENST00000537162 ECM1Q16610 540 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 TTC22Q5TAA0 569 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 SERPINA13PQ6UXR4 307 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 OXR1Q8N573 874 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 ZSCAN1Q8NBB4 408 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 RDH13Q8NBN7 331 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 MYLPFQ96A32 169 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 TCTN2Q96GX1 697 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 FUBP3Q96I24 572 aaKnown RBP eCLIP10.04□□□□□ -0.8
CPSF7-217ENST00000537162 SERAC1Q96JX3 654 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 UNKQ9C0B0 810 aaKnown RBP10.04□□□□□ -0.8
CPSF7-217ENST00000537162 TUFT1Q9NNX1 390 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 CASS4Q9NQ75 786 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 GJB4Q9NTQ9 266 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 ITGB1BP2Q9UKP3 347 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 ACSL6Q9UKU0 697 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 SLC27A6Q9Y2P4 619 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 PCDHGA7Q9Y5G6 932 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 SPG11Q96JI7 2443 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 UBE4BO95155 1302 aa10.04□□□□□ -0.8
CPSF7-217ENST00000537162 CCDC187A0A096LP49 1063 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 SFI1A8K8P3 1242 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 K7EM74 188 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 NPC1O15118 1278 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 HIP1RO75146 1068 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 VPS4BO75351 444 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 DDAH2O95865 285 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 PPP3CCP48454 512 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 NOP14P78316 857 aaKnown RBP10.03□□□□□ -0.8
CPSF7-217ENST00000537162 CCT2P78371 535 aaKnown RBP10.03□□□□□ -0.8
CPSF7-217ENST00000537162 MAPK7Q13164 816 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 DRAP1Q14919 205 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-217ENST00000537162 TMEM132DQ14C87 1099 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 CALCRLQ16602 461 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 GUSBP11Q6P575 273 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 FAM171BQ6P995 826 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 RBM44Q6ZP01 1051 aaKnown RBP10.03□□□□□ -0.8
CPSF7-217ENST00000537162 HTR3DQ70Z44 454 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 FAM114A1Q8IWE2 563 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 MARVELD3Q96A59 401 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 PIWIL1Q96J94 861 aaKnown RBP10.03□□□□□ -0.8
CPSF7-217ENST00000537162 BHMT2Q9H2M3 363 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 ZNF106Q9H2Y7 1883 aaKnown RBP10.03□□□□□ -0.8
CPSF7-217ENST00000537162 TMEM245Q9H330 911 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 MTG2Q9H4K7 406 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 CRTAC1Q9NQ79 661 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 CYLDQ9NQC7 956 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 PRSS16Q9NQE7 514 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 ELOVL2Q9NXB9 296 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 DPP3Q9NY33 737 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 CHORDC1Q9UHD1 332 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-217ENST00000537162 VPS4AQ9UN37 437 aa10.03□□□□□ -0.8
CPSF7-217ENST00000537162 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-217ENST00000537162 F8VP50 259 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms