RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 GABBR2O75899 941 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 NEFHP12036 1026 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 LCP1P13796 627 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 NPR3P17342 541 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 ADORA2BP29275 332 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 SULT1E1P49888 294 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 KCNJ2P63252 427 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 MRPS5P82675 430 aaKnown RBP12.37□□□□□ -0.43
ATM-222ENST00000533733 PRKD1Q15139 912 aaPredicted RBP12.37□□□□□ -0.43
ATM-222ENST00000533733 INTS6LQ5JSJ4 861 aaKnown RBP12.37□□□□□ -0.43
ATM-222ENST00000533733 MORN1Q5T089 497 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 NCBP2-AS2Q69YL0 99 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 TAF2Q6P1X5 1199 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 LRRC8BQ6P9F7 803 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 TLK2Q86UE8 772 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 FAM228AQ86W67 206 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 PPM1NQ8N819 430 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 NPLOC4Q8TAT6 608 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 SLC2A14Q8TDB8 520 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 NTAN1Q96AB6 310 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 C7orf26Q96N11 449 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 SYT17Q9BSW7 474 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 B3GNT5Q9BYG0 378 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 AP5M1Q9H0R1 490 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 DPEP3Q9H4B8 488 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 YY1AP1Q9H869 796 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 DTLQ9NZJ0 730 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 GINS2Q9Y248 185 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 C17orf102A2RUQ5 167 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 C9IYK1 514 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 E7ENQ6 273 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 MTSS1O43312 755 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 ALDH1A2O94788 518 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 PYGBP11216 843 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 CCDC130P13994 396 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 PTPN4P29074 926 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 HOXC8P31273 242 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 CRHR1P34998 444 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 SERPINB4P48594 390 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 LHX1P48742 406 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 HCAR3P49019 387 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 GJA9P57773 515 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 LILRA4P59901 499 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 PAFAH1B3Q15102 231 aaKnown RBP12.36□□□□□ -0.43
ATM-222ENST00000533733 RAB6CQ53S08 254 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 UBXN11Q5T124 520 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 SPRYD7Q5W111 196 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 OLFML2BQ68BL8 750 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 KYAT3Q6YP21 454 aaKnown RBP12.36□□□□□ -0.43
ATM-222ENST00000533733 UNC5AQ6ZN44 842 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 MARK2Q7KZI7 788 aaKnown RBP12.36□□□□□ -0.43
ATM-222ENST00000533733 TMEM130Q8N3G9 435 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 C2orf69Q8N8R5 385 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 CCDC110Q8TBZ0 833 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 DNAJB3Q8WWF6 145 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 SERAC1Q96JX3 654 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 SLC2A13Q96QE2 648 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 SRPK1Q96SB4 655 aaKnown RBP12.36□□□□□ -0.43
ATM-222ENST00000533733 RAB6CQ9H0N0 254 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 LRRC4Q9HBW1 653 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 CD248Q9HCU0 757 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 NOP53Q9NZM5 478 aaKnown RBP12.36□□□□□ -0.43
ATM-222ENST00000533733 GGT7Q9UJ14 662 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 PLLPQ9Y342 182 aa12.36□□□□□ -0.43
ATM-222ENST00000533733 TRPM7Q96QT4 1865 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 SDR42E2A6NKP2 422 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 ERI2A8K979 691 aaKnown RBP12.35□□□□□ -0.43
ATM-222ENST00000533733 AP3B1O00203 1094 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 GABRDO14764 452 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 LMNAP02545 664 aaKnown RBP12.35□□□□□ -0.43
ATM-222ENST00000533733 KRT16P08779 473 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 FGFR1P11362 822 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATM-222ENST00000533733 ARFIP2P53365 341 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 GBE1Q04446 702 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 TMEM62Q0P6H9 643 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 SF3A3Q12874 501 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATM-222ENST00000533733 FRG1Q14331 258 aaKnown RBP12.35□□□□□ -0.43
ATM-222ENST00000533733 KRT72Q14CN4 511 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 TBCCQ15814 346 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 GLRA4Q5JXX5 417 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 ANKRD20A2Q5SQ80 823 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 WASHC2DQ5SRD0 308 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 ANKRD20A1Q5TYW2 823 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 ANKRD20A3Q5VUR7 823 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 ZNF534Q76KX8 674 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 PIGZQ86VD9 579 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 DEFB106AQ8N104 65 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 SIX6OS1Q8N1H7 587 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 TAB3Q8N5C8 712 aaPredicted RBP12.35□□□□□ -0.43
ATM-222ENST00000533733 ANKLE1Q8NAG6 615 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 SPOCK2Q92563 424 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 ATP2A3Q93084 1043 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 STAMBPL1Q96FJ0 436 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 PGAP3Q96FM1 320 aaPredicted RBP12.35□□□□□ -0.43
ATM-222ENST00000533733 FAM111AQ96PZ2 611 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 NPY6RQ99463 290 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 TRIM62Q9BVG3 475 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 FAM96AQ9H5X1 160 aa12.35□□□□□ -0.43
ATM-222ENST00000533733 TLE6Q9H808 572 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms