RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 PLK4O00444 970 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 BCAT2O15382 392 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 CD6P30203 668 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 PPP3CCP48454 512 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 ACOT2P49753 483 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 CYP24A1Q07973 514 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 TBX2Q13207 712 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 SYCP1Q15431 976 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 INTS6LQ5JSJ4 861 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 C10orf76Q5T2E6 689 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 SPECC1LQ69YQ0 1117 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 CRELD2Q6UXH1 353 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 CCDC186Q7Z3E2 898 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 SPATA2LQ8IUW3 424 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 SCN4BQ8IWT1 228 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 ZCCHC9Q8N567 271 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 CADM4Q8NFZ8 388 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 PLEKHO2Q8TD55 490 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 TMC2Q8TDI7 906 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 IPO4Q8TEX9 1081 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 SLC35C1Q96A29 364 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 OTUB2Q96DC9 234 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 FUBP3Q96I24 572 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 CEP295NLQ96MC4 621 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 ZNF560Q96MR9 790 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 ERGIC2Q96RQ1 377 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 DPP3Q9NY33 737 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 IMPACTQ9P2X3 320 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 CPSF3Q9UKF6 684 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 STARD13Q9Y3M8 1113 aa11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 HELZP42694 1942 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-213ENST00000533149 TRIM49P0CI25 452 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 TRIM49CP0CI26 452 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 HNF1BP35680 557 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 PNPLA4P41247 253 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 DLG4P78352 724 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 MYL7Q01449 175 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 PTPRNQ16849 979 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 TAF1BQ53T94 588 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 C1orf220Q5T0J3 134 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 CHPFQ8IZ52 775 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 PARD3BQ8TEW8 1205 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 CCDC127Q96BQ5 260 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 WBP1Q96G27 269 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 MRGPRX1Q96LB2 322 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 PCMTD1Q96MG8 357 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 MIR1-1HGQ9H1L0 117 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 DDX43Q9NXZ2 648 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 CFAP97Q9P2B7 532 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 GTF3C4Q9UKN8 822 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 CPQQ9Y646 472 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 AK5Q9Y6K8 562 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 MYH11P35749 1972 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 ZNF462Q96JM2 2506 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 ITIH6Q6UXX5 1313 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 ANK1P16157 1881 aa11.92□□□□□ -0.5
TRAPPC4-213ENST00000533149 TULP3O75386 442 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 OLFM2O95897 454 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 CDK4P11802 303 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 NCAM1P13591 858 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 JUPP14923 745 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 WASP42768 502 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 GRK6P43250 576 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 MAGEA11P43364 429 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 FMO5P49326 533 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 KLK7P49862 253 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 SEMG2Q02383 582 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 ENPEPQ07075 957 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 PPP3CAQ08209 521 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 KCNMA1Q12791 1236 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 PSMD6Q15008 389 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 CCDC157Q569K6 752 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 LY6G5CQ5SRR4 150 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 DHRS13Q6UX07 377 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 METTL3Q86U44 580 aaKnown RBP11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 ETFBKMTQ8IXQ9 262 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 TMEM86AQ8N2M4 240 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 PDCL2Q8N4E4 241 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 NAT16Q8N8M0 369 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 TERB1Q8NA31 727 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 SNIP1Q8TAD8 396 aaKnown RBP11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 CPLX3Q8WVH0 158 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 SPATA17Q96L03 361 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 PKMYT1Q99640 499 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 CRACR2AQ9BSW2 395 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 RNF38Q9H0F5 515 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 MMRN2Q9H8L6 949 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 CD248Q9HCU0 757 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 SMPD4Q9NXE4 827 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 RBAKQ9NYW8 714 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 SIK3Q9Y2K2 1263 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 ANAPC1Q9H1A4 1944 aa11.91□□□□□ -0.5
TRAPPC4-213ENST00000533149 E2F8A0AVK6 867 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 ZNF840PA6NDX5 716 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 LRRIQ3A6PVS8 624 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 B8ZZF3 427 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 SCAMP3O14828 347 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 HOXC11O43248 304 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 209.6 ms