RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 HEYLQ9NQ87 328 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 MBNL1Q9NR56 388 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 SOHLH2Q9NX45 425 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 SIRT5Q9NXA8 310 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 TMOD2Q9NZR1 351 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 TEKT2Q9UIF3 430 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 SLCO3A1Q9UIG8 710 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 TLK1Q9UKI8 766 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 TNFSF13BQ9Y275 285 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 MED16Q9Y2X0 877 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 WASF2Q9Y6W5 498 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 CLIP1P30622 1438 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 HAX1O00165 279 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 POLR2DO15514 142 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 SIGLEC6O43699 453 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 DYRK3O43781 588 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 BUB1BO60566 1050 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 GUCY1B2O75343 617 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 AHSGP02765 367 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 TXNP10599 105 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 KRT5P13647 590 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 TIMP2P16035 220 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 SYN1P17600 705 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 MALP21145 153 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 CTSKP43235 329 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 CCR10P46092 362 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 GCLCP48506 637 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 LIG4P49917 911 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 ERVFC1P60507 584 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 YWHAZP63104 245 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 ID3Q02535 119 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 NFIXQ14938 502 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 NOMO1Q15155 1222 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 PCSK7Q16549 785 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 DGKDQ16760 1214 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 ANKRD20A4Q4UJ75 823 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 SLC44A4Q53GD3 710 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 ANKRD20A8PQ5CZ79 823 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 ANKRD20A2Q5SQ80 823 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 ANKRD20A1Q5TYW2 823 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 ANKRD20A3Q5VUR7 823 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 KLHL35Q6PF15 583 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 NCEH1Q6PIU2 408 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 FIGNL1Q6PIW4 674 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 USP17L6PQ6QN14 398 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 CRTC3Q6UUV7 619 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 CHST9Q7L1S5 443 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 CCDC28AQ8IWP9 274 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 ANKLE1Q8NAG6 615 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 RNF214Q8ND24 703 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 URGCPQ8TCY9 931 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 SGCDQ92629 289 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 CORO2AQ92828 525 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 PIP5K1AQ99755 562 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 PRRX2Q99811 253 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 MLPHQ9BV36 600 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 CAPS2Q9BXY5 557 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 MAGEE1Q9HCI5 957 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 CHST7Q9NS84 486 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 PPP1R14DQ9NXH3 145 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 CWC15Q9P013 229 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 ZNF70Q9UC06 446 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 RCOR1Q9UKL0 485 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 SARDHQ9UL12 918 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 PSME2Q9UL46 239 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 BTBD3Q9Y2F9 522 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 PCDHGC4Q9Y5F7 938 aa5.48□□□□□ -1.53
ECHDC1-222ENST00000531967 BIVM-ERCC5R4GMW8 1640 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 FAM171A2A8MVW0 826 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 AXIN1O15169 862 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CETN3O15182 167 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 PPP6R2O75170 966 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 RECQL5O94762 991 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 OR2C1O95371 312 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 NTSR2O95665 410 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 HMGCRP04035 888 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 S100A9P06702 114 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CPB1P15086 417 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 PPARAQ07869 468 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 SPIRE1Q08AE8 756 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CCDC173Q0VFZ6 552 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 GPS1Q13098 491 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 MSANTD1Q6ZTZ1 278 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 CCDC80Q76M96 950 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 TAF8Q7Z7C8 310 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 NIPA2Q8N8Q9 360 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 OR56A3Q8NH54 315 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 RNF141Q8WVD5 230 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 MIEF2Q96C03 454 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 SGF29Q96ES7 293 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 BCL7BQ9BQE9 202 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 SYT17Q9BSW7 474 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 SCPEP1Q9HB40 452 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 INTS6Q9UL03 887 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 NAALAD2Q9Y3Q0 740 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 ERICH3Q5RHP9 1530 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 NPHP3-ACAD11A0A0J9YXS1 232 aa5.47□□□□□ -1.53
ECHDC1-222ENST00000531967 GOLGA6L7A0A1B0GV03 622 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms