RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ZNF480Q8WV37 535 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 LRTOMTQ8WZ04 291 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 KCNN1Q92952 543 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 RAB24Q969Q5 203 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 CYFIP2Q96F07 1278 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 TNIP3Q96KP6 325 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 MRGPRX4Q96LA9 322 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 SIGLEC10Q96LC7 697 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 LSM14BQ9BX40 385 aaKnown RBP7.72□□□□□ -1.17
SVIP-204ENST00000530199 L2HGDHQ9H9P8 463 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 BCO1Q9HAY6 547 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 EPB41L4AQ9HCS5 686 aaPredicted RBP7.72□□□□□ -1.17
SVIP-204ENST00000530199 ARHGEF3Q9NR81 526 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 TRPS1Q9UHF7 1281 aa7.72□□□□□ -1.17
SVIP-204ENST00000530199 C17orf102A2RUQ5 167 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 CFAP69A5D8W1 941 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 C2orf78A6NCI8 922 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 EIF4E1BA6NMX2 242 aaKnown RBP7.71□□□□□ -1.18
SVIP-204ENST00000530199 HIDE1A8MVS5 230 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 IFRD1O00458 451 aaPredicted RBP7.71□□□□□ -1.18
SVIP-204ENST00000530199 ALDH1A2O94788 518 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 WEE2P0C1S8 567 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 SREBF1P36956 1147 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 MEOX1P50221 254 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 STAT2P52630 851 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 PER3P56645 1201 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 WNT3AP56704 352 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 MTX1Q13505 466 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 PCOLCEQ15113 449 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 LONRF1Q17RB8 773 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 PLPP4Q5VZY2 271 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 TSHZ1Q6ZSZ6 1077 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 Q6ZUG5 572 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 SRLQ86TD4 932 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 PQLC1Q8N2U9 271 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 SLC44A3Q8N4M1 653 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 OR7D4Q8NG98 312 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 CCHCR1Q8TD31 782 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 SDR42E1Q8WUS8 393 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 ATP6V0A1Q93050 837 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 PDCD2LQ9BRP1 358 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 DDX23Q9BUQ8 820 aaKnown RBP7.71□□□□□ -1.18
SVIP-204ENST00000530199 NLRC4Q9NPP4 1024 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 PRMT8Q9NR22 394 aaPredicted RBP7.71□□□□□ -1.18
SVIP-204ENST00000530199 IRAK3Q9Y616 596 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 MYH7BA7E2Y1 1941 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 MYO18BQ8IUG5 2567 aa7.71□□□□□ -1.18
SVIP-204ENST00000530199 HECTD1Q9ULT8 2610 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 B4DLN1 442 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 DDX3XO00571 662 aaKnown RBP eCLIP7.7□□□□□ -1.181e-13■■■■■ 27.6
SVIP-204ENST00000530199 PPFIA4O75335 1185 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 STAG3L1P0CL83 205 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 MRPL12P52815 198 aaKnown RBP7.7□□□□□ -1.18
SVIP-204ENST00000530199 NKX6-1P78426 367 aaPredicted RBP7.7□□□□□ -1.18
SVIP-204ENST00000530199 KHDC1Q4VXA5 237 aaKnown RBP7.7□□□□□ -1.18
SVIP-204ENST00000530199 RARS2Q5T160 578 aaKnown RBP7.7□□□□□ -1.18
SVIP-204ENST00000530199 DCLRE1AQ6PJP8 1040 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 APOA5Q6Q788 366 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 HEATR3Q7Z4Q2 680 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 RSPH3Q86UC2 560 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 REXO1L1PQ8IX06 675 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 FAM186BQ8IYM0 893 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 LILRA3Q8N6C8 439 aaPredicted RBP7.7□□□□□ -1.18
SVIP-204ENST00000530199 PLA2G15Q8NCC3 412 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 PPTC7Q8NI37 304 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 IFI44Q8TCB0 444 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 CHURC1Q8WUH1 139 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 MRPS27Q92552 414 aaKnown RBP7.7□□□□□ -1.18
SVIP-204ENST00000530199 AJUBAQ96IF1 538 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 YTHDC1Q96MU7 727 aaKnown RBP7.7□□□□□ -1.18
SVIP-204ENST00000530199 NT5C1BQ96P26 610 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 TCF25Q9BQ70 676 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 NUP62CLQ9H1M0 184 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 ARMT1Q9H993 441 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 SLC2A4RGQ9NR83 387 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 ATP8A2Q9NTI2 1148 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 LMBRD1Q9NUN5 540 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 ING3Q9NXR8 418 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 RTEL1Q9NZ71 1219 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 CALCOCO1Q9P1Z2 691 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 PUF60Q9UHX1 559 aaKnown RBP7.7□□□□□ -1.18
SVIP-204ENST00000530199 PCDHA3Q9Y5H8 950 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 KALRNO60229 2985 aa7.7□□□□□ -1.18
SVIP-204ENST00000530199 IGKV6D-41A0A0C4DH26 115 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 TMEM232C9JQI7 657 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 MGEA5O60502 916 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 GASTP01350 101 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 AMY1AP04745 511 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 ICAM1P05362 532 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 ZNF286BP0CG31 522 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 CRHR1P34998 444 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 KIR2DL3P43628 341 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 IRAK1P51617 712 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 FGL2Q14314 439 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 RAB39AQ14964 217 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 POLD3Q15054 466 aaPredicted RBP7.69□□□□□ -1.18
SVIP-204ENST00000530199 LY6KQ17RY6 165 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 GPR149Q86SP6 731 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 WDR63Q8IWG1 891 aa7.69□□□□□ -1.18
SVIP-204ENST00000530199 MRPL43Q8N983 215 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms