RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 TTC33Q6PID6 262 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 FAM83AQ86UY5 434 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 C11orf74Q86VG3 221 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 SLC26A11Q86WA9 606 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 ARHGEF19Q8IW93 802 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CAVIN3Q969G5 261 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 SMARCD1Q96GM5 515 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 QKIQ96PU8 341 aaKnown RBP eCLIP8.72□□□□□ -1.012e-8■■□□□ 14.5
CTNND1-221ENST00000529873 TBL1YQ9BQ87 522 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 NAT9Q9BTE0 207 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CDC42EP4Q9H3Q1 356 aaKnown RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 NDUFA13Q9P0J0 144 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 RABL2AQ9UBK7 228 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CTNNAL1Q9UBT7 734 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 TRIM66O15016 1216 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 BIRC5O15392 142 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 ACADMP11310 421 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 ACADSP16219 412 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 GRK3P35626 688 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.72□□□□□ -1.013e-8■■■■□ 24.5
CTNND1-221ENST00000529873 TBL3Q12788 808 aaKnown RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CDKAL1Q5VV42 579 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 FBXO44Q9H4M3 255 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 DPP7Q9UHL4 492 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 DNAJC16Q9Y2G8 782 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 UBXN8O00124 270 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 DYRK3O43781 588 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 IFNA14P01570 189 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CCNG1P51959 295 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 TGM3Q08188 693 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 ELAVL2Q12926 359 aaKnown RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CDC16Q13042 620 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 RCN1Q15293 331 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 TAS1R2Q8TE23 839 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 MTERF3Q96E29 417 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 NFKBIZQ9BYH8 718 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 EFCAB1Q9HAE3 211 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 VTA1Q9NP79 307 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CPA4Q9UI42 421 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 NEURL4Q96JN8 1562 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 KANSL1LA0AUZ9 987 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 MAGEA13PA6NCF6 341 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 HACD1B0YJ81 288 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 FAM47E-STBD1D6RA91 191 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 RNF103O00237 685 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 NR5A2O00482 541 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 XPO1O14980 1071 aaKnown RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 RGL2O15211 777 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CAPN1P07384 714 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CYP2A7P20853 494 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CALB2P22676 271 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 NAB1Q13506 487 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 SLC30A10Q6XR72 485 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 TRIM74Q86UV6 250 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 TRIM73Q86UV7 250 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 LRRC6Q86X45 466 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 NT5DC4Q86YG4 428 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 SCUBE1Q8IWY4 988 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CPNE1Q99829 537 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 KCTD14Q9BQ13 255 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 SYT15Q9BQS2 421 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 PDCD2LQ9BRP1 358 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CLEC4MQ9H2X3 399 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 HPS4Q9NQG7 708 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.72□□□□□ -1.013e-9■□□□□ 10.4
CTNND1-221ENST00000529873 KIF1AQ12756 1690 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 TBKBP1A7MCY6 615 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 RTN3O95197 1032 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CPSF4O95639 269 aaKnown RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 ALDH2P05091 517 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 ERVK-10P10266 1014 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 TGFB3P10600 412 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 MSH3P20585 1137 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CCR1P32246 355 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 NR2C2P49116 596 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 NUP107P57740 925 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 PPIL2Q13356 520 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 ZNF268Q14587 947 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 C2CD6Q53TS8 623 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 C10orf53Q8N6V4 93 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 BBS2Q9BXC9 721 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 MTFR1LQ9H019 292 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 PCDH9Q9HC56 1237 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CAPN10Q9HC96 672 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 MAN1C1Q9NR34 630 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 SNCAIPQ9Y6H5 919 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 CAPN6Q9Y6Q1 641 aa8.72□□□□□ -1.01
CTNND1-221ENST00000529873 MAP2P11137 1827 aaKnown RBP8.72□□□□□ -1.01
CTNND1-221ENST00000529873 ADGRA3Q8IWK6 1321 aa8.71□□□□□ -1.01
CTNND1-221ENST00000529873 LOC100653049A0A140TA62 436 aa8.71□□□□□ -1.01
CTNND1-221ENST00000529873 SYNCRIPO60506 623 aaKnown RBP8.71□□□□□ -1.01
CTNND1-221ENST00000529873 KRT34O76011 436 aa8.71□□□□□ -1.01
CTNND1-221ENST00000529873 DLGAP3O95886 979 aa8.71□□□□□ -1.01
CTNND1-221ENST00000529873 AMHP03971 560 aa8.71□□□□□ -1.01
CTNND1-221ENST00000529873 RRM1P23921 792 aa8.71□□□□□ -1.01
CTNND1-221ENST00000529873 MAD2L1Q13257 205 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-221ENST00000529873 NBPF12Q5TAG4 269 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-221ENST00000529873 SLC27A1Q6PCB7 646 aa8.71□□□□□ -1.01
CTNND1-221ENST00000529873 TMC5Q6UXY8 1006 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms