RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 DHPSP49366 369 aaPredicted RBP9.48□□□□□ -0.89
CMTM1-210ENST00000528441 TBX4P57082 545 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 SNX16P57768 344 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 CREB5Q02930 508 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 STARD3Q14849 445 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 STX1AQ16623 288 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 RAB41Q5JT25 222 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 EMC10Q5UCC4 262 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 OR6B2Q6IFH4 312 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 PMF1Q6P1K2 205 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 DENND1BQ6P3S1 775 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 KIAA1324Q6UXG2 1013 aaKnown RBP9.48□□□□□ -0.89
CMTM1-210ENST00000528441 CLEC4CQ8WTT0 213 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 KCTD13Q8WZ19 329 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 HSFY1Q96LI6 401 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 KREMEN1Q96MU8 473 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 DDX50Q9BQ39 737 aaKnown RBP9.48□□□□□ -0.89
CMTM1-210ENST00000528441 NDST4Q9H3R1 872 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 FAM204AQ9H8W3 233 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 ANO10Q9NW15 660 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 WDR70Q9NW82 654 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 STIM2Q9P246 746 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 AGO1Q9UL18 857 aaKnown RBP9.48□□□□□ -0.89
CMTM1-210ENST00000528441 HBS1LQ9Y450 684 aaKnown RBP9.48□□□□□ -0.89
CMTM1-210ENST00000528441 TRIM24O15164 1050 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 SYNCRIPO60506 623 aaKnown RBP9.47□□□□□ -0.89
CMTM1-210ENST00000528441 RETP07949 1114 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 PON1P27169 355 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 HOXC13P31276 330 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 APBA1Q02410 837 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 LMNB2Q03252 620 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 BYSLQ13895 437 aaKnown RBP9.47□□□□□ -0.89
CMTM1-210ENST00000528441 E2F5Q15329 346 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 SYCP1Q15431 976 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 CCDC6Q16204 474 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 CRY1Q16526 586 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 HSF5Q4G112 596 aaPredicted RBP9.47□□□□□ -0.89
CMTM1-210ENST00000528441 MPPE1Q53F39 396 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 CCDC183Q5T5S1 534 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 EGFLAMQ63HQ2 1017 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 NUGGCQ68CJ6 796 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 ARMCX6Q7L4S7 300 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 ANKS1BQ7Z6G8 1248 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 C11orf74Q86VG3 221 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 SFTPA1Q8IWL2 248 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 UNC45BQ8IWX7 931 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 FAM160A2Q8N612 972 aaPredicted RBP9.47□□□□□ -0.89
CMTM1-210ENST00000528441 UBR7Q8N806 425 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 SUMF1Q8NBK3 374 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 MSANTD4Q8NCY6 345 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 LMO3Q8TAP4 145 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 ADAM32Q8TC27 787 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 ZNF606Q8WXB4 792 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 IRGQQ8WZA9 623 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 SERPINB11Q96P15 392 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 MED15Q96RN5 788 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 VPS16Q9H269 839 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 ARRDC1-AS1Q9H2J1 176 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 SAMSN1Q9NSI8 373 aaKnown RBP9.47□□□□□ -0.89
CMTM1-210ENST00000528441 SEPT11Q9NVA2 429 aaKnown RBP9.47□□□□□ -0.89
CMTM1-210ENST00000528441 TJP2Q9UDY2 1190 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 SLC12A6Q9UHW9 1150 aa9.47□□□□□ -0.89
CMTM1-210ENST00000528441 GTPBP10A4D1E9 387 aaKnown RBP9.46□□□□□ -0.9
CMTM1-210ENST00000528441 E5RJQ4 531 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 SGK1O00141 431 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 DCLK1O15075 740 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 CACNG3O60359 315 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 TBL1XO60907 577 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 PNMA6AP0CW24 399 aaPredicted RBP9.46□□□□□ -0.9
CMTM1-210ENST00000528441 TDGF1P13385 188 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 EEF1GP26641 437 aaKnown RBP9.46□□□□□ -0.9
CMTM1-210ENST00000528441 NTSR1P30989 418 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 BPIFB4P59827 614 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 ZNF445P59923 1031 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
CMTM1-210ENST00000528441 GAB4Q2WGN9 574 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 FNDC3BQ53EP0 1204 aaKnown RBP9.46□□□□□ -0.9
CMTM1-210ENST00000528441 TAF3Q5VWG9 929 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 PM20D1Q6GTS8 502 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 TOGARAM2Q6ZUX3 1019 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 CYP2U1Q7Z449 544 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 KBTBD6Q86V97 674 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 CHSY1Q86X52 802 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 CACUL1Q86Y37 369 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 SCUBE3Q8IX30 993 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 IL17RCQ8NAC3 791 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 C1orf131Q8NDD1 294 aaKnown RBP9.46□□□□□ -0.9
CMTM1-210ENST00000528441 MDGA1Q8NFP4 955 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 GPT2Q8TD30 523 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 SLC35F5Q8WV83 523 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 RLN3Q8WXF3 142 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 EZH1Q92800 747 aaPredicted RBP9.46□□□□□ -0.9
CMTM1-210ENST00000528441 TMA16Q96EY4 203 aaKnown RBP9.46□□□□□ -0.9
CMTM1-210ENST00000528441 SPAG5Q96R06 1193 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 NAT10Q9H0A0 1025 aaKnown RBP9.46□□□□□ -0.9
CMTM1-210ENST00000528441 ACP6Q9NPH0 428 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 CACNA2D2Q9NY47 1150 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 MARK1Q9P0L2 795 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 RAD54BQ9Y620 910 aa9.46□□□□□ -0.9
CMTM1-210ENST00000528441 PTPRZ1P23471 2315 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms