RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 UBE2Q1Q7Z7E8 422 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 HERC6Q8IVU3 1022 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 IZUMO1Q8IYV9 350 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 ZNF276Q8N554 614 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 ZNF713Q8N859 430 aaPredicted RBP5.28□□□□□ -1.56
CD44-220ENST00000525688 LSMEM1Q8N8F7 131 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 CHST13Q8NET6 341 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 SCAMP5Q8TAC9 235 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 IL17DQ8TAD2 202 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 THAP4Q8WY91 577 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 HVCN1Q96D96 273 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 RSPRY1Q96DX4 576 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 ZBTB45Q96K62 511 aaPredicted RBP5.28□□□□□ -1.56
CD44-220ENST00000525688 C17orf80Q9BSJ5 609 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 BDH2Q9BUT1 245 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 VN1R3Q9BXE9 311 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 ACTRT3Q9BYD9 372 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 KLC2Q9H0B6 622 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 UNC45AQ9H3U1 944 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 RAPGEFL1Q9UHV5 662 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 ST6GALNAC2Q9UJ37 374 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 RIMKLBQ9ULI2 386 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 USP22Q9UPT9 525 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 MAGED1Q9Y5V3 778 aaPredicted RBP5.28□□□□□ -1.56
CD44-220ENST00000525688 NCOA1Q15788 1441 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 CNTLNQ9NXG0 1405 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 KIF15Q9NS87 1388 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 DUOX2Q9NRD8 1548 aa5.28□□□□□ -1.56
CD44-220ENST00000525688 ADGRL2O95490 1459 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 PNMA6EA0A0J9YXQ4 647 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 B9A039 149 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 J3KTA2 159 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 CHL1O00533 1208 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 PPM1DO15297 605 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 PROM1O43490 865 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 GFPT2O94808 682 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 CD4P01730 458 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 GYS1P13807 737 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 PPP3CBP16298 524 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 LAG3P18627 525 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 NTSR1P30989 418 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 HOXD12P35452 270 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 CDK7P50613 346 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 ADAM17P78536 824 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 ITIH3Q06033 890 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 SCAPQ12770 1279 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 GRM4Q14833 912 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 PTPRKQ15262 1439 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 ADCK5Q3MIX3 580 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 DEPDC1Q5TB30 811 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 NFRKBQ6P4R8 1299 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 C4orf50Q6ZRC1 276 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 TTLL10Q6ZVT0 673 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 FASTKD5Q7L8L6 764 aaKnown RBP5.27□□□□□ -1.57
CD44-220ENST00000525688 LCA5Q86VQ0 697 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 LNX2Q8N448 690 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 APPL2Q8NEU8 664 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 OR6Y1Q8NGX8 325 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 SLC30A5Q8TAD4 765 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 WDR60Q8WVS4 1066 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 RUBCNQ92622 972 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 TPSD1Q9BZJ3 242 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 TWSG1Q9GZX9 223 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 EPS8L2Q9H6S3 715 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 FSCN3Q9NQT6 498 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 RXFP3Q9NSD7 469 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 ANKEF1Q9NU02 776 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 NKIRAS2Q9NYR9 191 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 RRBP1Q9P2E9 1410 aaKnown RBP5.27□□□□□ -1.57
CD44-220ENST00000525688 SLC27A6Q9Y2P4 619 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 FAM135AQ9P2D6 1515 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 ANKRD30AQ9BXX3 1397 aa5.27□□□□□ -1.57
CD44-220ENST00000525688 EIF2AK4Q9P2K8 1649 aaKnown RBP5.26□□□□□ -1.57
CD44-220ENST00000525688 ERBINQ96RT1 1412 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 FAM90A18PA6NE21 464 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 FAM90A16PA6NEW6 464 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 FAM90A9PA6NNJ1 464 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 SMTNL1A8MU46 457 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 FAM90A5PA8MXJ8 464 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 C19orf81C9J6K1 198 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 K7ESM1 405 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 EYA2O00167 538 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 LPXNO60711 386 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 TAF5LO75529 589 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 SPDEFO95238 335 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 PRKCBP05771 671 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 FAM90A15PP0C7V4 464 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 FAM90A14PP0C7W9 464 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 CD19P15391 556 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 KLRK1P26718 216 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 ZNF131P52739 623 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 NXPH1P58417 271 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 SP2Q02086 613 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 NFIXQ14938 502 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 DNAJC21Q5F1R6 531 aaKnown RBP5.26□□□□□ -1.57
CD44-220ENST00000525688 SLC9A4Q6AI14 798 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 RINT1Q6NUQ1 792 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 CCDC129Q6ZRS4 1044 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 RAB11FIP2Q7L804 512 aa5.26□□□□□ -1.57
CD44-220ENST00000525688 GPR149Q86SP6 731 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms