RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 HMG20BQ9P0W2 317 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 SLC25A10Q9UBX3 287 aaPredicted RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 ZC3H7BQ9UGR2 993 aaKnown RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 SLCO3A1Q9UIG8 710 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 TSPYL4Q9UJ04 414 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 TUBE1Q9UJT0 475 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 KCND3Q9UK17 655 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 DSEQ9UL01 958 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 TBC1D30Q9Y2I9 924 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.72□□□□□ -1.65
CD44-213ENST00000525209 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 DNMBPQ6XZF7 1577 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 IL16Q14005 1332 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 ZNF335Q9H4Z2 1342 aaPredicted RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 PBRM1Q86U86 1689 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 FAM90A20PA6NIJ5 464 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 O00370 1275 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 TNFSF14O43557 240 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 BUB1BO60566 1050 aaPredicted RBP4.71□□□□□ -1.66
CD44-213ENST00000525209 TULP3O75386 442 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 RECQL5O94762 991 aaPredicted RBP4.71□□□□□ -1.66
CD44-213ENST00000525209 SLITRK3O94933 977 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 AHSGP02765 367 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 C4BPAP04003 597 aaKnown RBP4.71□□□□□ -1.66
CD44-213ENST00000525209 ANXA6P08133 673 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 NID1P14543 1247 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 PDGFRAP16234 1089 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 SYN1P17600 705 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 PFKLP17858 780 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 ITGB7P26010 798 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 KLRK1P26718 216 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 SERPINA4P29622 427 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 ICAM3P32942 547 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 GJA4P35212 333 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 MAGEA4P43358 317 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CAMLGP49069 296 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CENPAP49450 140 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 DIO1P49895 249 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 ETV1P50549 477 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CTBP1Q13363 440 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 RIPK1Q13546 671 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 SNX1Q13596 522 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 PDK1Q15118 436 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CHRNA2Q15822 529 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 GRIK4Q16099 956 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 IMMTQ16891 758 aaKnown RBP4.71□□□□□ -1.66
CD44-213ENST00000525209 BTBD16Q32M84 506 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 MYLK3Q32MK0 819 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CRY2Q49AN0 593 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 SLC39A12Q504Y0 691 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 XKR9Q5GH70 373 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 LIPMQ5VYY2 423 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 SHEQ5VZ18 495 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 LETMD1Q6P1Q0 360 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CTR9Q6PD62 1173 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 KLHL35Q6PF15 583 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 NCEH1Q6PIU2 408 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 ISLR2Q6UXK2 745 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 C20orf204Q6ZNR8 217 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 MSANTD1Q6ZTZ1 278 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 TAX1BP1Q86VP1 789 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CPNE8Q86YQ8 564 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CCDC28AQ8IWP9 274 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 YAF2Q8IY57 180 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 SIX6OS1Q8N1H7 587 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 ARRDC4Q8NCT1 418 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 RFWD2Q8NHY2 731 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CCDC110Q8TBZ0 833 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 SUN5Q8TC36 379 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 NUDT8Q8WV74 236 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CPT1BQ92523 772 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 RABGGTAQ92696 567 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 KLHDC7BQ96G42 594 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CEP295NLQ96MC4 621 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 PKP4Q99569 1192 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 SYT17Q9BSW7 474 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 MLPHQ9BV36 600 aaPredicted RBP4.71□□□□□ -1.66
CD44-213ENST00000525209 STRA6Q9BX79 667 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 GCOM2Q9BZD3 368 aaPredicted RBP4.71□□□□□ -1.66
CD44-213ENST00000525209 DPH5Q9H2P9 285 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 VCPKMTQ9H867 229 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CYP4F12Q9HCS2 524 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 MBNL1Q9NR56 388 aaKnown RBP4.71□□□□□ -1.66
CD44-213ENST00000525209 PCDHB16Q9NRJ7 776 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 GLRX2Q9NS18 164 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 TMEM51Q9NW97 253 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CWC15Q9P013 229 aaKnown RBP4.71□□□□□ -1.66
CD44-213ENST00000525209 LIMA1Q9UHB6 759 aaKnown RBP4.71□□□□□ -1.66
CD44-213ENST00000525209 MID2Q9UJV3 735 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CAPN11Q9UMQ6 739 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 SLC6A14Q9UN76 642 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 RPH3AQ9Y2J0 694 aaPredicted RBP4.71□□□□□ -1.66
CD44-213ENST00000525209 KCNE2Q9Y6J6 123 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 MROH5Q6ZUA9 1318 aa4.71□□□□□ -1.66
CD44-213ENST00000525209 CCDC88BA6NC98 1476 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 FRMD3A2A2Y4 597 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 CTAGE15A4D2H0 777 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 LRRIQ4A6NIV6 560 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 LRRC72A6NJI9 287 aa4.7□□□□□ -1.66
CD44-213ENST00000525209 OR6C76A6NM76 312 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms