RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 CYFIP2Q96F07 1278 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 MSANTD3Q96H12 275 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 PSMB7Q99436 277 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 ACBD6Q9BR61 282 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 CARD9Q9H257 536 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 ARFGAP3Q9NP61 516 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 HPS4Q9NQG7 708 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 POLR3BQ9NW08 1133 aaPredicted RBP10.3□□□□□ -0.76
CAPN11-202ENST00000524554 ADAM22Q9P0K1 906 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 SIX4Q9UIU6 781 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 L1RE1Q9UN81 338 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 PCDHB5Q9Y5E4 795 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 ALG6Q9Y672 507 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 TRIP11Q15643 1979 aa10.3□□□□□ -0.76
CAPN11-202ENST00000524554 DCDC2BA2VCK2 349 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 CCDC188H7C350 402 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 MYO1FO00160 1098 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 PGRMC1O00264 195 aaKnown RBP10.29□□□□□ -0.76
CAPN11-202ENST00000524554 GABRDO14764 452 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 ATP8B1O43520 1251 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 CEP104O60308 925 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 RHOXF2BP0C7M4 288 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 ACAT1P24752 427 aaKnown RBP10.29□□□□□ -0.76
CAPN11-202ENST00000524554 CYP2F1P24903 491 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 HOXA6P31267 233 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 PNPLA4P41247 253 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 DNA2P51530 1060 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 SIM2Q14190 667 aaPredicted RBP10.29□□□□□ -0.76
CAPN11-202ENST00000524554 LRRC32Q14392 662 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 MESDQ14696 234 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 PPP2R5DQ14738 602 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 VEPH1Q14D04 833 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 STILQ15468 1287 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 TERF2Q15554 542 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 TAF12Q16514 161 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 ITPRIPL2Q3MIP1 535 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 SV2CQ496J9 727 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 MAP9Q49MG5 647 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 TRIM68Q6AZZ1 485 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 WDR93Q6P2C0 686 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 FBXO38Q6PIJ6 1188 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 C1orf228Q6PIY5 440 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 MON1AQ86VX9 555 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 OSTM1Q86WC4 334 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 CPA5Q8WXQ8 436 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 CYP2S1Q96SQ9 504 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 RHOXF2Q9BQY4 288 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 MIS12Q9H081 205 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 LHX5Q9H2C1 402 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 TDP1Q9NUW8 608 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 PARVAQ9NVD7 372 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 THG1LQ9NWX6 298 aaKnown RBP10.29□□□□□ -0.76
CAPN11-202ENST00000524554 GDAP2Q9NXN4 497 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 RAB21Q9UL25 225 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 STRIP2Q9ULQ0 834 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 PACSIN2Q9UNF0 486 aaPredicted RBP10.29□□□□□ -0.76
CAPN11-202ENST00000524554 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.29□□□□□ -0.76
CAPN11-202ENST00000524554 F5P12259 2224 aa10.29□□□□□ -0.76
CAPN11-202ENST00000524554 PDCD11Q14690 1871 aaKnown RBP10.29□□□□□ -0.76
CAPN11-202ENST00000524554 PRR5-ARHGAP8B1AHC4 643 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 PDE2AO00408 941 aaPredicted RBP10.28□□□□□ -0.76
CAPN11-202ENST00000524554 SPOPO43791 374 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 ATP2C2O75185 946 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 RETP07949 1114 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 VDRP11473 427 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 ARSAP15289 507 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 CD19P15391 556 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 CDH5P33151 784 aaPredicted RBP10.28□□□□□ -0.76
CAPN11-202ENST00000524554 GALK1P51570 392 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 ARHGAP8P85298 464 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 C2orf54Q08AI8 447 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 RUNX3Q13761 415 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 SOWAHAQ2M3V2 549 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 TMEM196Q5HYL7 178 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 LAIR1Q6GTX8 287 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 FSTL4Q6MZW2 842 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 FAM171BQ6P995 826 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 SCARA5Q6ZMJ2 495 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 PRR23BQ6ZRT6 265 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 MON1BQ7L1V2 547 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 LIMS2Q7Z4I7 341 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 LONP2Q86WA8 852 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 SYNPOQ8N3V7 929 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 RASGEF1CQ8N431 466 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 NOA1Q8NC60 698 aaKnown RBP10.28□□□□□ -0.76
CAPN11-202ENST00000524554 HNRNPLLQ8WVV9 542 aaKnown RBP10.28□□□□□ -0.76
CAPN11-202ENST00000524554 TMEM176AQ96HP8 235 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 ZNF560Q96MR9 790 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 SLC22A12Q96S37 553 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 EBF3Q9H4W6 596 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 DDX43Q9NXZ2 648 aaKnown RBP10.28□□□□□ -0.76
CAPN11-202ENST00000524554 GMEB2Q9UKD1 530 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 TTC7AQ9ULT0 858 aaPredicted RBP10.28□□□□□ -0.76
CAPN11-202ENST00000524554 USP18Q9UMW8 372 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 MAGED2Q9UNF1 606 aaPredicted RBP10.28□□□□□ -0.76
CAPN11-202ENST00000524554 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
CAPN11-202ENST00000524554 GOLGA6L10A0A0M3HER8 536 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 TMEM110-MUSTN1A8MSY1 372 aa10.28□□□□□ -0.76
CAPN11-202ENST00000524554 TRDMT1O14717 391 aaKnown RBP10.28□□□□□ -0.76
CAPN11-202ENST00000524554 HUS1O60921 280 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms