RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 CLP1Q92989 425 aaKnown RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 SKA1Q96BD8 255 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 ELMO3Q96BJ8 720 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 FAM136AQ96C01 138 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 ZBTB10Q96DT7 871 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 PTCD3Q96EY7 689 aaKnown RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 SAMD11Q96NU1 681 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 NECAB3Q96P71 396 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 LRRC37BQ96QE4 947 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 PCYT2Q99447 389 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 C11orf70Q9BRQ4 267 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 PI4K2AQ9BTU6 479 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 KIFC3Q9BVG8 833 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 MAK16Q9BXY0 300 aaKnown RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 FAM49AQ9H0Q0 323 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 KIF9Q9HAQ2 790 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 MRPL47Q9HD33 250 aaKnown RBP8.14□□□□□ -1.11
SPIDR-223ENST00000524033 XPNPEP1Q9NQW7 623 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.14□□□□□ -1.118e-7■■■■■ 253.8
SPIDR-223ENST00000524033 IP6K2Q9UHH9 426 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 HAO1Q9UJM8 370 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 DNPEPQ9ULA0 475 aa8.14□□□□□ -1.11
SPIDR-223ENST00000524033 PTPRJQ12913 1337 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 A0A1W2PPM1 405 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 A0A1W2PRU2 124 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 TMEM191CA6NGB0 347 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 C3orf70A6NLC5 250 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 WDR64B1ANS9 1081 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 TMEM229AB2RXF0 380 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 H3BNC9 293 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 M0QZ92 97 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 CLGNO14967 610 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 ZNF862O60290 1169 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 GFRA3O60609 400 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 NEBLO76041 1014 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 KRT1P04264 644 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 TMEM191BP0C7N4 346 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 TCF4P15884 667 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 CD58P19256 250 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 MMP8P22894 467 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 GLRA2P23416 452 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 ALDH3A1P30838 453 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 CDH5P33151 784 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 ABCD1P33897 745 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 RPA3P35244 121 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 SLC26A2P50443 739 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 MRPS35P82673 323 aaKnown RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 MRPS6P82932 125 aaKnown RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 OGDHQ02218 1023 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 RNASELQ05823 741 aaKnown RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 MGAT3Q09327 533 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 GPM6BQ13491 265 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 CUL2Q13617 745 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 TLR1Q15399 786 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 MAPK6Q16659 721 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 XKR9Q5GH70 373 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 FBXO47Q5MNV8 452 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 FAM102BQ5T8I3 360 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 SWSAP1Q6NVH7 229 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 ABHD15Q6UXT9 468 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 TSHZ1Q6ZSZ6 1077 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 SH2D5Q6ZV89 423 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 ANO5Q75V66 913 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 NME8Q8N427 588 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 FIBCD1Q8N539 461 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 NAT8LQ8N9F0 302 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 BANPQ8N9N5 519 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 TTC8Q8TAM2 541 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 ZNF483Q8TF39 744 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 DCAKDQ8WVC6 231 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 POMGNT1Q8WZA1 660 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 CCDC127Q96BQ5 260 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 ALKBH8Q96BT7 664 aaKnown RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 MRPL38Q96DV4 380 aaKnown RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 SMC6Q96SB8 1091 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 CGRRF1Q99675 332 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 FAM118BQ9BPY3 351 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 HEMGNQ9BXL5 484 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 OSBPL1AQ9BXW6 950 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 FRMD8P1Q9BZ68 369 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 DENND2DQ9H6A0 471 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 ACSS3Q9H6R3 686 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 KMT5AQ9NQR1 393 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 ARHGEF4Q9NR80 690 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 CNTN3Q9P232 1028 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 EFR3BQ9Y2G0 817 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 ASB3Q9Y575 518 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 CDY2AQ9Y6F7 541 aa8.13□□□□□ -1.11
SPIDR-223ENST00000524033 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.13□□□□□ -1.11
SPIDR-223ENST00000524033 CNTNAP2Q9UHC6 1331 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 IGKV6D-21A0A0A0MT36 114 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 TM9SF1O15321 606 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 AHCYL1O43865 530 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 TGDSO95455 350 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 CBX6O95503 412 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 LSM8O95777 96 aaKnown RBP8.12□□□□□ -1.11
SPIDR-223ENST00000524033 FESP07332 822 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 ZSCAN5DPP0CG00 497 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 ETS1P14921 441 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms