RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 THAP4Q8WY91 577 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 C3orf49Q96BT1 292 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 SDCCAG3Q96C92 435 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 FBXO28Q9NVF7 368 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 PCDHB7Q9Y5E2 793 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 H0Y3Z8 333 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 LARGE1O95461 756 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 PLA2G5P39877 138 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 PRKAA2P54646 552 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 SIM1P81133 766 aaPredicted RBP7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 TXNL4AP83876 142 aaKnown RBP7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 CALD1Q05682 793 aaKnown RBP7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 SF3A3Q12874 501 aaKnown RBP eCLIP7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 LMAN2Q12907 356 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 CUL4BQ13620 913 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 RPS6KA2Q15349 733 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 FBXO47Q5MNV8 452 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 ANKRD45Q5TZF3 282 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 CYP26C1Q6V0L0 522 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 RINLQ6ZS11 566 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 MRGPRGQ86SM5 289 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 HMGB4Q8WW32 186 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 CPT1BQ92523 772 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 EVI5LQ96CN4 794 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 CHFRQ96EP1 664 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 PRR11Q96HE9 360 aaPredicted RBP7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 CINPQ9BW66 212 aaPredicted RBP7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 CCDC134Q9H6E4 229 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 SAP30LQ9HAJ7 183 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 PACSIN3Q9UKS6 424 aa7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 UBE2J1Q9Y385 318 aaPredicted RBP7.5□□□□□ -1.21
NUDCD1-204ENST00000521439 LOC105369274A0A096LPK9 316 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 LOC102723532A0A0G2JNH3 316 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 B9A039 149 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 M0QZQ0 153 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 SUV39H1O43463 412 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 PDE8BO95263 885 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 ALADP13716 330 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 DRD4P21917 467 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 PAX3P23760 479 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 FPR3P25089 353 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 MAPK9P45984 424 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 ZNF569Q5MCW4 686 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 GRASPQ7Z6J2 395 aaPredicted RBP7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 FAM9BQ8IZU0 186 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 OR4N4Q8N0Y3 316 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 FAM71DQ8N9W8 422 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 TBC1D5Q92609 795 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 RILPL2Q969X0 211 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 UBXN10Q96LJ8 280 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 MECRQ9BV79 373 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 KCNK9Q9NPC2 374 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 VPS45Q9NRW7 570 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 LIN7CQ9NUP9 197 aaKnown RBP7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 NDUFAF4Q9P032 175 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 ZBTB1Q9Y2K1 713 aa7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 FNDC1Q4ZHG4 1894 aaPredicted RBP7.49□□□□□ -1.21
NUDCD1-204ENST00000521439 TTC36A6NLP5 189 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 EIF3FO00303 357 aaPredicted RBP7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 FOXN1O15353 648 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 GCP02774 474 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 TMIGD3P0DMS9 266 aaPredicted RBP7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 AARSP49588 968 aaKnown RBP eCLIP7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 CCDC15Q0P6D6 951 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 FAM153CQ494X1 144 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 RNASE12Q5GAN4 147 aaKnown RBP7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 ACSM6Q6P461 480 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 CASC1Q6TDU7 716 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 KIRREL2Q6UWL6 708 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 ZNF804AQ7Z570 1209 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 C12orf76Q8N812 135 aaPredicted RBP7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 CSGALNACT1Q8TDX6 532 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 AFG1LQ8WV93 481 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 REXO5Q96IC2 774 aaKnown RBP7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 FAR2Q96K12 515 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 SLITRK6Q9H5Y7 841 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 USP29Q9HBJ7 922 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 RRN3Q9NYV6 651 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 FEM1BQ9UK73 627 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 PCDHB2Q9Y5E7 798 aa7.48□□□□□ -1.21
NUDCD1-204ENST00000521439 ABCC9O60706 1549 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 A0A087X1B8 175 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 CCDC187A0A096LP49 1063 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 SERPINA4P29622 427 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 CXCR5P32302 372 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 THBS4P35443 961 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 IGHMBP2P38935 993 aaKnown RBP7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 GPC5P78333 572 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 EFR3AQ14156 821 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 TAF12Q16514 161 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 FAM187BQ17R55 369 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 AAK1Q2M2I8 961 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 GALNTL6Q49A17 601 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 C2CD5Q86YS7 1000 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 RASAL3Q86YV0 1011 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 HERC6Q8IVU3 1022 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 NPIPB3Q92617 1050 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 SNX18Q96RF0 628 aa7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 PYM1Q9BRP8 204 aaKnown RBP7.47□□□□□ -1.21
NUDCD1-204ENST00000521439 TWSG1Q9GZX9 223 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms