RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 HERC6Q8IVU3 1022 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 C7orf61Q8IZ16 206 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 FIBCD1Q8N539 461 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 CCDC89Q8N998 374 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 RNF139Q8WU17 664 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 OVCA2Q8WZ82 227 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 HINFPQ9BQA5 517 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 OSBPL2Q9H1P3 480 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 DPH5Q9H2P9 285 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 PCDH9Q9HC56 1237 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 GMIPQ9P107 970 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 PCDH10Q9P2E7 1040 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 SLC27A5Q9Y2P5 690 aa16.65■□□□□ 0.26
SNHG6-201ENST00000520348 ZNF638Q14966 1978 aaKnown RBP16.64■□□□□ 0.25
SNHG6-201ENST00000520348 SLC38A8A6NNN8 435 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 ZBBXA8MT70 800 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 H3BRJ5 948 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 MCF2LO15068 1137 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 FAM153BP0C7A2 387 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 CTSAP10619 480 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 RPL17P18621 184 aaKnown RBP16.64■□□□□ 0.25
SNHG6-201ENST00000520348 HSPA9P38646 679 aaKnown RBP16.64■□□□□ 0.25
SNHG6-201ENST00000520348 NR2C2P49116 596 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 DYNLT1P63172 113 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 NRG1Q02297 640 aaPredicted RBP16.64■□□□□ 0.25
SNHG6-201ENST00000520348 PPP1R7Q15435 360 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 ARL13BQ3SXY8 428 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 FAM153CQ494X1 144 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 ARTNQ5T4W7 220 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 SNX30Q5VWJ9 437 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 PYROXD2Q8N2H3 581 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 ADAM32Q8TC27 787 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.64■□□□□ 0.25
SNHG6-201ENST00000520348 IFT81Q8WYA0 676 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 CASP10Q92851 521 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 ART4Q93070 314 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 HAUS1Q96CS2 278 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 RTP4Q96DX8 246 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 SLC39A13Q96H72 371 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 SERPINB11Q96P15 392 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 RAD9AQ99638 391 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 SEPT5Q99719 369 aaPredicted RBP16.64■□□□□ 0.25
SNHG6-201ENST00000520348 FAM118BQ9BPY3 351 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 MAK16Q9BXY0 300 aaKnown RBP16.64■□□□□ 0.25
SNHG6-201ENST00000520348 MAGEB5Q9BZ81 275 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 TXLNGYQ9BZA5 131 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 ARHGEF4Q9NR80 690 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNHG6-201ENST00000520348 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNHG6-201ENST00000520348 FAM153AQ9UHL3 310 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 SNX24Q9Y343 169 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 PCDHB12Q9Y5F1 795 aa16.64■□□□□ 0.25
SNHG6-201ENST00000520348 DCLK1O15075 740 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 SOAT2O75908 522 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 FGF18O76093 207 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 SEC24AO95486 1093 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 GOT1P17174 413 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 HOXC13P31276 330 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 HTR7P34969 479 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 ARL4AP40617 200 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 EIF3EP60228 445 aaKnown RBP16.63■□□□□ 0.25
SNHG6-201ENST00000520348 XRCC4Q13426 336 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 PPP6R3Q5H9R7 873 aaPredicted RBP16.63■□□□□ 0.25
SNHG6-201ENST00000520348 MANEALQ5VSG8 457 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 NCBP2-AS2Q69YL0 99 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 SND1Q7KZF4 910 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNHG6-201ENST00000520348 VPS52Q8N1B4 723 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 P3H4Q92791 437 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 FBXO32Q969P5 355 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 TRMT2BQ96GJ1 504 aaKnown RBP16.63■□□□□ 0.25
SNHG6-201ENST00000520348 MYRFLQ96LU7 910 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 CCDC114Q96M63 670 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 OLFM3Q96PB7 478 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 HAPLN3Q96S86 360 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 TMPRSS4Q9NRS4 437 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 OLA1Q9NTK5 396 aaKnown RBP16.63■□□□□ 0.25
SNHG6-201ENST00000520348 SAE1Q9UBE0 346 aaPredicted RBP16.63■□□□□ 0.25
SNHG6-201ENST00000520348 NEU3Q9UQ49 428 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 LZTS1Q9Y250 596 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 SSX2IPQ9Y2D8 614 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 YIPF1Q9Y548 306 aa16.63■□□□□ 0.25
SNHG6-201ENST00000520348 BCLAF3A2AJT9 711 aaKnown RBP16.62■□□□□ 0.25
SNHG6-201ENST00000520348 CFAP69A5D8W1 941 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 KCNU1A8MYU2 1149 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 IGLV3-27P01718 113 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 KRT14P02533 472 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 RBP3P10745 1247 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 HMGA1P17096 107 aaKnown RBP16.62■□□□□ 0.25
SNHG6-201ENST00000520348 ITIH2P19823 946 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 CAV1Q03135 178 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 TAF10Q12962 218 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 HLTFQ14527 1009 aaKnown RBP eCLIP16.62■□□□□ 0.256e-8■□□□□ 8.6
SNHG6-201ENST00000520348 PAFAH1B3Q15102 231 aaKnown RBP16.62■□□□□ 0.25
SNHG6-201ENST00000520348 SPDYCQ5MJ68 293 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 NPNTQ6UXI9 565 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 RFX8Q6ZV50 586 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 TCEAL8Q8IYN2 117 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 BBOF1Q8ND07 529 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 STKLD1Q8NE28 680 aa16.62■□□□□ 0.25
SNHG6-201ENST00000520348 FBXO25Q8TCJ0 367 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms