RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 PAK1Q13153 545 aa16.3■□□□□ 0.2
CLK4-205ENST00000520199 STIM1Q13586 685 aa16.3■□□□□ 0.2
CLK4-205ENST00000520199 ENPP2Q13822 863 aa16.3■□□□□ 0.2
CLK4-205ENST00000520199 CCDC40Q4G0X9 1142 aa16.3■□□□□ 0.2
CLK4-205ENST00000520199 USP39Q53GS9 565 aaKnown RBP16.3■□□□□ 0.2
CLK4-205ENST00000520199 FMNL3Q8IVF7 1028 aa16.3■□□□□ 0.2
CLK4-205ENST00000520199 CCDC26Q8TAB7 109 aa16.3■□□□□ 0.2
CLK4-205ENST00000520199 INTS2Q9H0H0 1204 aaKnown RBP16.3■□□□□ 0.2
CLK4-205ENST00000520199 CACNA2D2Q9NY47 1150 aa16.3■□□□□ 0.2
CLK4-205ENST00000520199 STOML2Q9UJZ1 356 aa16.3■□□□□ 0.2
CLK4-205ENST00000520199 LSM7Q9UK45 103 aaKnown RBP16.3■□□□□ 0.2
CLK4-205ENST00000520199 KIAA1257Q9ULG3 409 aa16.3■□□□□ 0.2
CLK4-205ENST00000520199 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 LNP1A1A4G5 178 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 CDX4O14627 284 aaPredicted RBP16.29■□□□□ 0.2
CLK4-205ENST00000520199 CAVIN2O95810 425 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 LCP1P13796 627 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 NDUFV2P19404 249 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 TRIM21P19474 475 aaKnown RBP16.29■□□□□ 0.2
CLK4-205ENST00000520199 GBP1P32455 592 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 DGKGP49619 791 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 GCNT1Q02742 428 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 STPG1Q5TH74 334 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 RNF43Q68DV7 783 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 MSANTD2Q6P1R3 559 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 TMEFF1Q8IYR6 380 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 CPXM2Q8N436 756 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
CLK4-205ENST00000520199 SORCS1Q8WY21 1168 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 VPS45Q9NRW7 570 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 CALCOCO1Q9P1Z2 691 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 ASPMQ8IZT6 3477 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 CEP295Q9C0D2 2601 aa16.29■□□□□ 0.2
CLK4-205ENST00000520199 NYNRINQ9P2P1 1898 aaKnown RBP16.29■□□□□ 0.2
CLK4-205ENST00000520199 DOCK9Q9BZ29 2069 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 RHOBTB1O94844 696 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 SETSIPP0DME0 302 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 HOXB2P14652 356 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 SLC9A1P19634 815 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 HOXD9P28356 352 aaPredicted RBP16.28■□□□□ 0.2
CLK4-205ENST00000520199 PPP1R2P41236 205 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 GPD2P43304 727 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 UBE2HP62256 183 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 IRX4P78413 519 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 GOLGA8FQ08AF8 430 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 GOLGA8DPQ0D2H9 430 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 DENND1BQ6P3S1 775 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 ARHGAP18Q8N392 663 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 WFDC5Q8TCV5 224 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 LMLNQ96KR4 655 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 XPO6Q96QU8 1125 aaKnown RBP16.28■□□□□ 0.2
CLK4-205ENST00000520199 CRACR2AQ9BSW2 395 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 LRRC4Q9HBW1 653 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 SIX2Q9NPC8 291 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 CNGB3Q9NQW8 809 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 TJP2Q9UDY2 1190 aa16.28■□□□□ 0.2
CLK4-205ENST00000520199 IGHV1OR15-9A0A0B4J2B8 117 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 GOLGA6L7A0A1B0GV03 622 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 BICDL2A1A5D9 508 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 AFPP02771 609 aaKnown RBP16.27■□□□□ 0.2
CLK4-205ENST00000520199 SDHBP21912 280 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 SLC6A4P31645 630 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 IL12RB1P42701 662 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
CLK4-205ENST00000520199 ELF2Q15723 593 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 FAM133BQ5BKY9 247 aaKnown RBP16.27■□□□□ 0.2
CLK4-205ENST00000520199 PPM1JQ5JR12 505 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 NADSYN1Q6IA69 706 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 SLC41A1Q8IVJ1 513 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 WDTC1Q8N5D0 677 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 DEFB119Q8N690 84 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 PLD4Q96BZ4 506 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 MRGPRX1Q96LB2 322 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 CDK5RAP1Q96SZ6 601 aaKnown RBP16.27■□□□□ 0.2
CLK4-205ENST00000520199 DCLK3Q9C098 648 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 POLMQ9NP87 494 aaPredicted RBP16.27■□□□□ 0.2
CLK4-205ENST00000520199 THAP10Q9P2Z0 257 aaPredicted RBP16.27■□□□□ 0.2
CLK4-205ENST00000520199 HESX1Q9UBX0 185 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 RWDD2AQ9UIY3 292 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLK4-205ENST00000520199 STON1Q9Y6Q2 735 aa16.27■□□□□ 0.2
CLK4-205ENST00000520199 USP24Q9UPU5 2620 aa16.27■□□□□ 0.19
CLK4-205ENST00000520199 ZZEF1O43149 2961 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 M0QYV0 167 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 TSPAN3O60637 253 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 ITPKAP23677 461 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 HLA-FP30511 346 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 CHKAP35790 457 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 PITX1P78337 314 aaPredicted RBP16.26■□□□□ 0.19
CLK4-205ENST00000520199 AASDHQ4L235 1098 aaPredicted RBP16.26■□□□□ 0.19
CLK4-205ENST00000520199 SYPL2Q5VXT5 272 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 PEAR1Q5VY43 1037 aaPredicted RBP16.26■□□□□ 0.19
CLK4-205ENST00000520199 RSRC2Q7L4I2 434 aaKnown RBP16.26■□□□□ 0.19
CLK4-205ENST00000520199 ARMCX6Q7L4S7 300 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 KIAA0907Q7Z7F0 614 aaPredicted RBP16.26■□□□□ 0.19
CLK4-205ENST00000520199 TADA2BQ86TJ2 420 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 SCUBE3Q8IX30 993 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 CHPFQ8IZ52 775 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 TRIML1Q8N9V2 468 aa16.26■□□□□ 0.19
CLK4-205ENST00000520199 MKRN2Q9H000 416 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms