RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 EPG5Q9HCE0 2579 aa26.49■■□□□ 1.83
VEGFA-220ENST00000519767 FGFR1OPO95684 399 aaKnown RBP26.48■■□□□ 1.83
VEGFA-220ENST00000519767 GCNT1Q02742 428 aa26.48■■□□□ 1.83
VEGFA-220ENST00000519767 DAB2IPQ5VWQ8 1189 aa26.48■■□□□ 1.83
VEGFA-220ENST00000519767 FMNL3Q8IVF7 1028 aa26.48■■□□□ 1.83
VEGFA-220ENST00000519767 FAM217AQ8IXS0 508 aa26.48■■□□□ 1.83
VEGFA-220ENST00000519767 FRMD1Q8N878 549 aa26.48■■□□□ 1.83
VEGFA-220ENST00000519767 IRGQQ8WZA9 623 aa26.48■■□□□ 1.83
VEGFA-220ENST00000519767 TFAP2BQ92481 460 aa26.48■■□□□ 1.83
VEGFA-220ENST00000519767 NDRG1Q92597 394 aaKnown RBP26.48■■□□□ 1.83
VEGFA-220ENST00000519767 CD248Q9HCU0 757 aa26.48■■□□□ 1.83
VEGFA-220ENST00000519767 CALCOCO1Q9P1Z2 691 aa26.48■■□□□ 1.83
VEGFA-220ENST00000519767 LNP1A1A4G5 178 aa26.47■■□□□ 1.83
VEGFA-220ENST00000519767 TIMM44O43615 452 aa26.47■■□□□ 1.83
VEGFA-220ENST00000519767 HOXD12P35452 270 aa26.47■■□□□ 1.83
VEGFA-220ENST00000519767 MFAP3P55082 362 aa26.47■■□□□ 1.83
VEGFA-220ENST00000519767 MARSP56192 900 aaKnown RBP26.47■■□□□ 1.83
VEGFA-220ENST00000519767 ZNF445P59923 1031 aa26.47■■□□□ 1.83
VEGFA-220ENST00000519767 LMAN2Q12907 356 aa26.47■■□□□ 1.83
VEGFA-220ENST00000519767 LYSMD4Q5XG99 296 aa26.47■■□□□ 1.83
VEGFA-220ENST00000519767 TRIM59Q8IWR1 403 aa26.47■■□□□ 1.83
VEGFA-220ENST00000519767 DDI1Q8WTU0 396 aa26.47■■□□□ 1.83
VEGFA-220ENST00000519767 THADAQ6YHU6 1953 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 CHD8Q9HCK8 2581 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 YJEFN3A6XGL0 299 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 C4orf47A7E2U8 309 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 E7ENQ6 273 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 BIN1O00499 593 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 GADD45BO75293 160 aaPredicted RBP26.46■■□□□ 1.83
VEGFA-220ENST00000519767 PTGER3P43115 390 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 KCNH2Q12809 1159 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 PAK1Q13153 545 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 MPPE1Q53F39 396 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 P2RY11Q96G91 374 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 PIWIL1Q96J94 861 aaKnown RBP26.46■■□□□ 1.83
VEGFA-220ENST00000519767 HSFY1Q96LI6 401 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 NUSAP1Q9BXS6 441 aaKnown RBP26.46■■□□□ 1.83
VEGFA-220ENST00000519767 TMEM9BQ9NQ34 198 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 CACNA2D2Q9NY47 1150 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 THAP10Q9P2Z0 257 aaPredicted RBP26.46■■□□□ 1.83
VEGFA-220ENST00000519767 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.46■■□□□ 1.83
VEGFA-220ENST00000519767 CTNND2Q9UQB3 1225 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.46■■□□□ 1.831e-11■□□□□ 9.4
VEGFA-220ENST00000519767 STON1Q9Y6Q2 735 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 GON4LQ3T8J9 2241 aa26.46■■□□□ 1.83
VEGFA-220ENST00000519767 RNF225M0QZC1 329 aaPredicted RBP26.45■■□□□ 1.82
VEGFA-220ENST00000519767 LATS1O95835 1130 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 LCP1P13796 627 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 DAOAP59103 153 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 IRX4P78413 519 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 RPL6Q02878 288 aaKnown RBP26.45■■□□□ 1.82
VEGFA-220ENST00000519767 STARD3Q14849 445 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 EIF4HQ15056 248 aaKnown RBP26.45■■□□□ 1.82
VEGFA-220ENST00000519767 KIAA1211LQ6NV74 962 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 PMF1Q6P1K2 205 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 ANKS1BQ7Z6G8 1248 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 TRIML1Q8N9V2 468 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 CEP76Q8TAP6 659 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 EDEM1Q92611 657 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 SRRTQ9BXP5 876 aaKnown RBP26.45■■□□□ 1.82
VEGFA-220ENST00000519767 STOML2Q9UJZ1 356 aa26.45■■□□□ 1.82
VEGFA-220ENST00000519767 FBXO21O94952 628 aa26.44■■□□□ 1.82
VEGFA-220ENST00000519767 AFPP02771 609 aaKnown RBP26.44■■□□□ 1.82
VEGFA-220ENST00000519767 NDUFV2P19404 249 aa26.44■■□□□ 1.82
VEGFA-220ENST00000519767 TRIM61Q5EBN2 209 aa26.44■■□□□ 1.82
VEGFA-220ENST00000519767 ADGRF1Q5T601 910 aa26.44■■□□□ 1.82
VEGFA-220ENST00000519767 RRAGAQ7L523 313 aa26.44■■□□□ 1.82
VEGFA-220ENST00000519767 RABEPKQ7Z6M1 372 aa26.44■■□□□ 1.82
VEGFA-220ENST00000519767 METTL3Q86U44 580 aaKnown RBP26.44■■□□□ 1.82
VEGFA-220ENST00000519767 RBBP8NLQ8NC74 664 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-220ENST00000519767 GOLGA1Q92805 767 aa26.44■■□□□ 1.82
VEGFA-220ENST00000519767 IRX2Q9BZI1 471 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-220ENST00000519767 ELOVL2Q9NXB9 296 aa26.44■■□□□ 1.82
VEGFA-220ENST00000519767 SFMBT1Q9UHJ3 866 aa26.44■■□□□ 1.82
VEGFA-220ENST00000519767 PILRBQ9UKJ0 227 aa26.44■■□□□ 1.82
VEGFA-220ENST00000519767 IGHV1OR15-9A0A0B4J2B8 117 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 PATE3B3GLJ2 98 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 WASH3PC4AMC7 463 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 KCNK5O95279 499 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 KCNA4P22459 653 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 STX17P56962 302 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 ENPP2Q13822 863 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 GEN1Q17RS7 908 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 ARMCX6Q7L4S7 300 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 UNC45BQ8IWX7 931 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 KAT5Q92993 513 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 TMA16Q96EY4 203 aaKnown RBP26.43■■□□□ 1.82
VEGFA-220ENST00000519767 MRGPRX1Q96LB2 322 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 TMEM74BQ9NUR3 256 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 CNTN6Q9UQ52 1028 aa26.43■■□□□ 1.82
VEGFA-220ENST00000519767 M0QYV0 167 aa26.42■■□□□ 1.82
VEGFA-220ENST00000519767 RGS7P49802 495 aa26.42■■□□□ 1.82
VEGFA-220ENST00000519767 N4BP2L1Q5TBK1 243 aaPredicted RBP26.42■■□□□ 1.82
VEGFA-220ENST00000519767 PEAR1Q5VY43 1037 aaPredicted RBP26.42■■□□□ 1.82
VEGFA-220ENST00000519767 MSANTD2Q6P1R3 559 aa26.42■■□□□ 1.82
VEGFA-220ENST00000519767 SLC23A3Q6PIS1 610 aa26.42■■□□□ 1.82
VEGFA-220ENST00000519767 ZSWIM1Q9BR11 485 aa26.42■■□□□ 1.82
VEGFA-220ENST00000519767 RAD54BQ9Y620 910 aa26.42■■□□□ 1.82
VEGFA-220ENST00000519767 CEP295Q9C0D2 2601 aa26.42■■□□□ 1.82
VEGFA-220ENST00000519767 CDX4O14627 284 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms