RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 KHSRPQ92945 711 aaKnown RBP eCLIP8.3□□□□□ -1.083e-6■■■□□ 16.4
CLK4-203ENST00000519583 ART4Q93070 314 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 SFXN1Q9H9B4 322 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 CYP4F11Q9HBI6 524 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 GOLGA6AQ9NYA3 693 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 MTRF1LQ9UGC7 380 aaKnown RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 FEZ2Q9UHY8 353 aaPredicted RBP8.3□□□□□ -1.08
CLK4-203ENST00000519583 CDH22Q9UJ99 828 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 NEU2Q9Y3R4 380 aa8.3□□□□□ -1.08
CLK4-203ENST00000519583 CLDN5O00501 218 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 PRRG1O14668 218 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 ATF2P15336 505 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 KDELR1P24390 212 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 IVDP26440 423 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 PCK1P35558 622 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 LHX1P48742 406 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 TSPY1Q01534 308 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 SMAD4Q13485 552 aaKnown RBP8.29□□□□□ -1.08
CLK4-203ENST00000519583 CCDC14Q49A88 953 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 TPGS2Q68CL5 300 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 KCTD6Q8NC69 237 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 SMRP1Q8NCR6 262 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 ASB2Q96Q27 587 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 AFF4Q9UHB7 1163 aaKnown RBP8.29□□□□□ -1.08
CLK4-203ENST00000519583 NFS1Q9Y697 457 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 CCDC195A0A1B0GUA6 201 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 GRXCR2A6NFK2 248 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 TP73O15350 636 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 MBTPS2O43462 519 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 ABLIM3O94929 683 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 C1RP00736 705 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 ADCY8P40145 1251 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 PMS2P54278 862 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 GPR17Q13304 367 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 BYSLQ13895 437 aaKnown RBP8.29□□□□□ -1.08
CLK4-203ENST00000519583 SLC39A12Q504Y0 691 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 PPM1LQ5SGD2 360 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 KCTD16Q68DU8 428 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 LRIG3Q6UXM1 1119 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 CYP4V2Q6ZWL3 525 aaPredicted RBP8.29□□□□□ -1.08
CLK4-203ENST00000519583 GSTA5Q7RTV2 222 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 FUKQ8N0W3 1084 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 SH2D3CQ8N5H7 860 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 SNF8Q96H20 258 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 DNAI2Q9GZS0 605 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 ZCWPW1Q9H0M4 648 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 S1PR5Q9H228 398 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 WHRNQ9P202 907 aa8.29□□□□□ -1.08
CLK4-203ENST00000519583 SAE1Q9UBE0 346 aaPredicted RBP8.29□□□□□ -1.08
CLK4-203ENST00000519583 USP15Q9Y4E8 981 aaPredicted RBP8.29□□□□□ -1.08
CLK4-203ENST00000519583 SPTBN5Q9NRC6 3674 aaKnown RBP8.29□□□□□ -1.08
CLK4-203ENST00000519583 DPYSL4O14531 572 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 PRPSAP2O60256 369 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 CST8O60676 142 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 SEC24AO95486 1093 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 IL9P15248 144 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 PTPN1P18031 435 aaKnown RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 PCSK1P29120 753 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 SDC4P31431 198 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 SNX16P57768 344 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ZNF844Q08AG5 666 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 SCYL2Q6P3W7 929 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 CCDC149Q6ZUS6 474 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 CCDC25Q86WR0 208 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 DCP1BQ8IZD4 617 aaKnown RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 ATAD1Q8NBU5 361 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 CMASQ8NFW8 434 aaPredicted RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 SPATA18Q8TC71 538 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 FAM172AQ8WUF8 416 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 EXOC4Q96A65 974 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 CALN1Q9BXU9 219 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ADAM7Q9H2U9 754 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 EPB41L4BQ9H329 900 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 PIDD1Q9HB75 910 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLK4-203ENST00000519583 ZNF148Q9UQR1 794 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 FAM50BQ9Y247 325 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 TSC2P49815 1807 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 MTMR11A4FU01 709 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 GABRDO14764 452 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 CCL16O15467 120 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 TFE3P19532 575 aaPredicted RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 LMAN1P49257 510 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ITGA8P53708 1063 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 DUSP4Q13115 394 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 MMRN1Q13201 1228 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 TAZQ16635 292 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 PUS10Q3MIT2 529 aaKnown RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 MDH1BQ5I0G3 518 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 UBAP2Q5T6F2 1119 aaKnown RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 PIGZQ86VD9 579 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 LRRTM3Q86VH5 581 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 RFX6Q8HWS3 928 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 GLIS1Q8NBF1 620 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 FAM76AQ8TAV0 307 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 SMG7Q92540 1137 aaKnown RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 HNRNPABQ99729 332 aaKnown RBP8.28□□□□□ -1.08
CLK4-203ENST00000519583 SYT15Q9BQS2 421 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 ACBD6Q9BR61 282 aa8.28□□□□□ -1.08
CLK4-203ENST00000519583 CENPHQ9H3R5 247 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms