RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 RPS6KB1P23443 525 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 HOXA7P31268 230 aaPredicted RBP3.23□□□□□ -1.89
PCM1-208ENST00000518877 CPT1AP50416 773 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 RAB27AP51159 221 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 COPAP53621 1224 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 STK3Q13188 491 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 SLC29A2Q14542 456 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 ST3GAL2Q16842 350 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 ODF3L2Q3SX64 289 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 NUGGCQ68CJ6 796 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 NADSYN1Q6IA69 706 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 GRHL2Q6ISB3 625 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 CLEC9AQ6UXN8 241 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 TFAP2DQ7Z6R9 452 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 RUNDC1Q96C34 613 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 MSI2Q96DH6 328 aaKnown RBP3.23□□□□□ -1.89
PCM1-208ENST00000518877 HIST1H2AAQ96QV6 131 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 GATA5Q9BWX5 397 aaPredicted RBP3.23□□□□□ -1.89
PCM1-208ENST00000518877 CHST8Q9H2A9 424 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 FZD3Q9NPG1 666 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 COL20A1Q9P218 1284 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 STEAP1Q9UHE8 339 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 L1RE1Q9UN81 338 aa3.23□□□□□ -1.89
PCM1-208ENST00000518877 NOP58Q9Y2X3 529 aaKnown RBP3.23□□□□□ -1.89
PCM1-208ENST00000518877 HEMK1Q9Y5R4 338 aaPredicted RBP3.23□□□□□ -1.89
PCM1-208ENST00000518877 A0A087WYN8 130 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 E2F8A0AVK6 867 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 FAM227AF5H4B4 570 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 SPTLC2O15270 562 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 FRS3O43559 492 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 RFPL1O75677 317 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 ACAA1P09110 424 aaPredicted RBP3.22□□□□□ -1.89
PCM1-208ENST00000518877 TXNP10599 105 aaKnown RBP3.22□□□□□ -1.89
PCM1-208ENST00000518877 ST6GAL1P15907 406 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 ACVR2AP27037 513 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 GALNSP34059 522 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 EIF4A1P60842 406 aaKnown RBP3.22□□□□□ -1.89
PCM1-208ENST00000518877 FMO1Q01740 532 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 CCDC15Q0P6D6 951 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 MTAPQ13126 283 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 DNASE1L3Q13609 305 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 KCNAB1Q14722 419 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 CNGA2Q16280 664 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 PLAG1Q6DJT9 500 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 LPAR1Q92633 364 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 ZDHHC12Q96GR4 267 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 ZNF668Q96K58 619 aaPredicted RBP3.22□□□□□ -1.89
PCM1-208ENST00000518877 CINPQ9BW66 212 aaPredicted RBP3.22□□□□□ -1.89
PCM1-208ENST00000518877 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 CDH19Q9H159 772 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 FAM83DQ9H4H8 585 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 MOV10Q9HCE1 1003 aaKnown RBP3.22□□□□□ -1.89
PCM1-208ENST00000518877 CD93Q9NPY3 652 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 DDX56Q9NY93 547 aaKnown RBP3.22□□□□□ -1.89
PCM1-208ENST00000518877 MID2Q9UJV3 735 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 HDAC9Q9UKV0 1011 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 CAPN11Q9UMQ6 739 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 THRAP3Q9Y2W1 955 aaKnown RBP3.22□□□□□ -1.89
PCM1-208ENST00000518877 COL15A1P39059 1388 aa3.22□□□□□ -1.89
PCM1-208ENST00000518877 TRBV5-3A0A0A0MS03 114 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 AQP7P3A6NL99 342 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 TMIGD3P0DMS9 266 aaPredicted RBP3.21□□□□□ -1.9
PCM1-208ENST00000518877 ZKSCAN1P17029 563 aaPredicted RBP3.21□□□□□ -1.9
PCM1-208ENST00000518877 TPH1P17752 444 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 HTR7P34969 479 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 IDUAP35475 653 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 WDR5P61964 334 aaKnown RBP3.21□□□□□ -1.9
PCM1-208ENST00000518877 RPS16P62249 146 aaKnown RBP3.21□□□□□ -1.9
PCM1-208ENST00000518877 EGR4Q05215 589 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 CLCA4Q14CN2 919 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 CNN3Q15417 329 aaKnown RBP3.21□□□□□ -1.9
PCM1-208ENST00000518877 IZUMO4Q1ZYL8 232 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 MANEALQ5VSG8 457 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 RBM44Q6ZP01 1051 aaKnown RBP3.21□□□□□ -1.9
PCM1-208ENST00000518877 P3H2Q8IVL5 708 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 UEVLDQ8IX04 471 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 ELP5Q8TE02 316 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 SELENOOQ9BVL4 669 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 SAP30LQ9HAJ7 183 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 THSD1Q9NS62 852 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 DNAJB11Q9UBS4 358 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 WNT16Q9UBV4 365 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 AFF4Q9UHB7 1163 aaKnown RBP3.21□□□□□ -1.9
PCM1-208ENST00000518877 TPCN1Q9ULQ1 816 aa3.21□□□□□ -1.9
PCM1-208ENST00000518877 hCG_2014768A0A024R1R8 64 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 A0A0G2JK05 382 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 CFAP69A5D8W1 941 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 SERINC4A6NH21 518 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 NTN3O00634 580 aaPredicted RBP3.2□□□□□ -1.9
PCM1-208ENST00000518877 PRPF4O43172 522 aaKnown RBP eCLIP3.2□□□□□ -1.9
PCM1-208ENST00000518877 PRPF3O43395 683 aaKnown RBP3.2□□□□□ -1.9
PCM1-208ENST00000518877 MARCH6O60337 910 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 SNX2O60749 519 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 ATG13O75143 517 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 PDGFRBP09619 1106 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 TMEM225BP0DP42 221 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 BRAFP15056 766 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 RHCEP18577 417 aa3.2□□□□□ -1.9
PCM1-208ENST00000518877 TFEBP19484 476 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms