RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 TBC1D3HP0C7X1 549 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 HSPA1AP0DMV8 641 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 HSPA1BP0DMV9 641 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 UBL4AP11441 157 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 LYL1P12980 280 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 GATA3P23771 443 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 GRK5P34947 590 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 COPB2P35606 906 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ARL3P36405 182 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PNPLA4P41247 253 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RPS3AP61247 264 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RPS7P62081 194 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RBM6P78332 1123 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SEMA3BQ13214 749 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 HLXQ14774 488 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PRICKLE4Q2TBC4 344 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NRN1LQ496H8 165 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 AASDHQ4L235 1098 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ZNF385BQ569K4 471 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 B3GNTL1Q67FW5 361 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D3GQ6DHY5 549 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D3CQ6IPX1 549 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 DPY19L3Q6ZPD9 716 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 Q6ZRM9 215 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CAND1Q86VP6 1230 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D3Q8IZP1 549 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 FUKQ8N0W3 1084 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PTGR2Q8N8N7 351 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 LINC01356Q8N9X3 169 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NFKBIDQ8NI38 313 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 METTL6Q8TCB7 284 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RUFY2Q8WXA3 655 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NACC2Q96BF6 587 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MIEF2Q96C03 454 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 KIF1BPQ96EK5 621 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 RNF31Q96EP0 1072 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 WDYHV1Q96HA8 205 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PPP1R10Q96QC0 940 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MPHOSPH9Q99550 1183 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ACTRT3Q9BYD9 372 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TPSD1Q9BZJ3 242 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 AMBRA1Q9C0C7 1298 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 INTS2Q9H0H0 1204 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TAOK3Q9H2K8 898 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 VEZTQ9HBM0 779 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 ZFP64Q9NPA5 681 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PCDHB16Q9NRJ7 776 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SEPT11Q9NVA2 429 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TAS2R10Q9NYW0 307 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TRPM5Q9NZQ8 1165 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 TBC1D14Q9P2M4 693 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 NFKBIL1Q9UBC1 381 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 EIF2B4Q9UI10 523 aaKnown RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 PCDHGB4Q9UN71 923 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 SLC12A4Q9UP95 1085 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 MAP3K2Q9Y2U5 619 aa3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 UBE2J1Q9Y385 318 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15.2-201ENST00000516409 CCDC187A0A096LP49 1063 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 MBD3L5A6NJ08 208 aaPredicted RBP3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 SH2D7A6NKC9 451 aaPredicted RBP3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 GTPBP1O00178 669 aaKnown RBP3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TSPAN4O14817 238 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NKX2-8O15522 239 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 HNRNPRO43390 633 aaKnown RBP3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 GUCY1B2O75343 617 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TULP3O75386 442 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TUBB4AP04350 444 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 C1QTNF9P0C862 333 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 LAMP2P13473 410 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CD19P15391 556 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PPP3CBP16298 524 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 HADHAP40939 763 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CLCN2P51788 898 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 EPHB4P54760 987 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CDH15P55291 814 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 SNX16P57768 344 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 LINC00310P59036 64 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NLRP5P59047 1200 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TAS2R50P59544 299 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CXADRP78310 365 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ZBED6P86452 979 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 MC1RQ01726 317 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CREB5Q02930 508 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CAMK1Q14012 370 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 KCNJ12Q14500 433 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 WTAPQ15007 396 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CYP2A13Q16696 494 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 UBXN11Q5T124 520 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NT5DC1Q5TFE4 455 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NAA35Q5VZE5 725 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 DENND1BQ6P3S1 775 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 GSPT2Q8IYD1 628 aaKnown RBP3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ADSSL1Q8N142 457 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TTC39CQ8N584 583 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 GLG1Q92896 1179 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NSUN4Q96CB9 384 aaKnown RBP3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 R3HDM4Q96D70 268 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RNFT2Q96EX2 444 aa3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PRR11Q96HE9 360 aaPredicted RBP3.58□□□□□ -1.84
SCARNA15.2-201ENST00000516409 FAR2Q96K12 515 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms