RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CMASQ8NFW8 434 aaPredicted RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 PJA1Q8NG27 643 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 CPT1CQ8TCG5 803 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 DNAJB3Q8WWF6 145 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 SLC9A6Q92581 669 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 STAMQ92783 540 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 GBP4Q96PP9 640 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 PDCD2LQ9BRP1 358 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 DDX23Q9BUQ8 820 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 CELF4Q9BZC1 486 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 TMEM117Q9H0C3 514 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 NAPBQ9H115 298 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 TBC1D17Q9HA65 648 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 ATP6V0A4Q9HBG4 840 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 KCNH7Q9NS40 1196 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 ERAP1Q9NZ08 941 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 SPG21Q9NZD8 308 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 COL20A1Q9P218 1284 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 EPS15L1Q9UBC2 864 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 DKK2Q9UBU2 259 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 RALYQ9UKM9 306 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 RAB23Q9ULC3 237 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 USP18Q9UMW8 372 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 TMA7Q9Y2S6 64 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 RBM8AQ9Y5S9 174 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 CDY2AQ9Y6F7 541 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 ZFP37Q9Y6Q3 630 aaPredicted RBP4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 CCDC171Q6TFL3 1326 aa4.17□□□□□ -1.74
PDLIM5-218ENST00000513341 RALGAPA1Q6GYQ0 2036 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 DENND4AQ7Z401 1863 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 SMIM35A0A1B0GVV1 85 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 KANSL1LA0AUZ9 987 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 TBKBP1A7MCY6 615 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 IKBKBO14920 756 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 MAFGO15525 162 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 RANBP6O60518 1105 aaKnown RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 NMT2O60551 498 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 HMMRO75330 724 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 CFBP00751 764 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 DCNP07585 359 aaKnown RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 ARP10275 920 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 PYGMP11217 842 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 PCP11498 1178 aaKnown RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 MYCLP12524 364 aaPredicted RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 GLULP15104 373 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 CCND2P30279 289 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 RPS9P46781 194 aaKnown RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 ALDH7A1P49419 539 aaKnown RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 ALDH6A1Q02252 535 aaKnown RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 CSTF1Q05048 431 aaKnown RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 PPFIA1Q13136 1202 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 SPIDRQ14159 915 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 PTPN14Q15678 1187 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 USH1GQ495M9 461 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 C2orf27AQ580R0 203 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 CCDC178Q5BJE1 867 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 SPECC1Q5M775 1068 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 MARCH8Q5T0T0 291 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 RARS2Q5T160 578 aaKnown RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 FAM102BQ5T8I3 360 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 N4BP2L1Q5TBK1 243 aaPredicted RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 SPATC1Q76KD6 591 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 CLEC14AQ86T13 490 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 DGKHQ86XP1 1220 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 NOSTRINQ8IVI9 506 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 FAM177A1Q8N128 213 aaPredicted RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 SYNPOQ8N3V7 929 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 PLA2G15Q8NCC3 412 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 SLC22A17Q8WUG5 538 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 HDAC7Q8WUI4 952 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 FRAT1Q92837 279 aaPredicted RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 CLDN23Q96B33 292 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 CHMP4CQ96CF2 233 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 PGBD4Q96DM1 585 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 ZNF558Q96NG5 402 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 INPP4AQ96PE3 977 aaPredicted RBP4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 KLHL5Q96PQ7 755 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 DNAJC7Q99615 494 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 FOXB1Q99853 325 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 C1QTNF7Q9BXJ2 289 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 SMARCAD1Q9H4L7 1026 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 SFXN1Q9H9B4 322 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 ARHGEF3Q9NR81 526 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 RXFP3Q9NSD7 469 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 ANKFY1Q9P2R3 1169 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 TUBE1Q9UJT0 475 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 RCAN3Q9UKA8 241 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 PCDHA1Q9Y5I3 950 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 TRPV2Q9Y5S1 764 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 MYH6P13533 1939 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 LOXHD1Q8IVV2 1947 aa4.16□□□□□ -1.74
PDLIM5-218ENST00000513341 MAST4O15021 2626 aa4.15□□□□□ -1.74
PDLIM5-218ENST00000513341 MIA3Q5JRA6 1907 aa4.15□□□□□ -1.74
PDLIM5-218ENST00000513341 ASH1LQ9NR48 2969 aaKnown RBP4.15□□□□□ -1.74
PDLIM5-218ENST00000513341 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.15□□□□□ -1.75
PDLIM5-218ENST00000513341 GAGE12BA1L429 117 aa4.15□□□□□ -1.75
PDLIM5-218ENST00000513341 DENND3A2RUS2 1198 aa4.15□□□□□ -1.75
PDLIM5-218ENST00000513341 BLACEA4D250 179 aa4.15□□□□□ -1.75
PDLIM5-218ENST00000513341 GAGE12HA6NDE8 117 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms