RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 AGTR2P50052 363 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 ZNF84P51523 738 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 FAM193AP78312 1265 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 B4GALNT1Q00973 533 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 MTA1Q13330 715 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 ERV3-1Q14264 604 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 GBX1Q14549 363 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 MIDNQ504T8 468 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 TMEM196Q5HYL7 178 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 FAM90A2PQ658T7 463 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 RAP1GAP2Q684P5 730 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 ABLIM2Q6H8Q1 611 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 CRTC1Q6UUV9 634 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 RBM44Q6ZP01 1051 aaKnown RBP2.7□□□□□ -1.98
PDGFC-208ENST00000512711 KIAA0408Q6ZU52 694 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 RFX6Q8HWS3 928 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 SDR16C5Q8N3Y7 309 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 RBMXL3Q8N7X1 1067 aaKnown RBP2.7□□□□□ -1.98
PDGFC-208ENST00000512711 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.7□□□□□ -1.98
PDGFC-208ENST00000512711 ARL14EPQ8N8R7 260 aaPredicted RBP2.7□□□□□ -1.98
PDGFC-208ENST00000512711 SMCR8Q8TEV9 937 aaPredicted RBP2.7□□□□□ -1.98
PDGFC-208ENST00000512711 LRRC46Q96FV0 321 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 WDR24Q96S15 920 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 CINPQ9BW66 212 aaPredicted RBP2.7□□□□□ -1.98
PDGFC-208ENST00000512711 MOV10Q9HCE1 1003 aaKnown RBP2.7□□□□□ -1.98
PDGFC-208ENST00000512711 ASNSD1Q9NWL6 643 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 MAFFQ9ULX9 164 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 CORO2BQ9UQ03 480 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 SNX13Q9Y5W8 968 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 EVPLQ92817 2033 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 NOTCH4Q99466 2003 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 TRBV5-3A0A0A0MS03 114 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 A0A0G2JK05 382 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 ATG13O75143 517 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 OAZ2O95190 189 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 EPN2O95208 641 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 CD63P08962 238 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 DRD1P21728 446 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 RPS6KB1P23443 525 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 HOXD12P35452 270 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 CDKN2AP42771 156 aaKnown RBP2.69□□□□□ -1.98
PDGFC-208ENST00000512711 SOX2P48431 317 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 ZNF543Q08ER8 600 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 BFSP2Q13515 415 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 ELF2Q15723 593 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 MANEAQ5SRI9 462 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 UBAP2Q5T6F2 1119 aaKnown RBP2.69□□□□□ -1.98
PDGFC-208ENST00000512711 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 KIAA1161Q6NSJ0 714 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 MZT2AQ6P582 158 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 ZNF793Q6ZN11 406 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 FAM57BQ71RH2 274 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 KRT28Q7Z3Y7 464 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 RNF152Q8N8N0 203 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 ATP11CQ8NB49 1132 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 LYZL4Q96KX0 146 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 HIPK2Q9H2X6 1198 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 TMEM8AQ9HCN3 771 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 ZMYND8Q9ULU4 1186 aaPredicted RBP2.69□□□□□ -1.98
PDGFC-208ENST00000512711 PCDHA12Q9UN75 941 aa2.69□□□□□ -1.98
PDGFC-208ENST00000512711 TRIP12Q14669 1992 aaPredicted RBP2.69□□□□□ -1.98
PDGFC-208ENST00000512711 AREL1O15033 823 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 KPNA5O15131 536 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 KCNQ3O43525 872 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 TLX3O43711 291 aaPredicted RBP2.68□□□□□ -1.98
PDGFC-208ENST00000512711 IL18RAPO95256 599 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 PLA2G2AP14555 144 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 DUSP1P28562 367 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 IL6STP40189 918 aaPredicted RBP2.68□□□□□ -1.98
PDGFC-208ENST00000512711 STAT6P42226 847 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 DAG1Q14118 895 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 PGM5Q15124 567 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 CNGA3Q16281 694 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 GFOD2Q3B7J2 385 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 TTLL5Q6EMB2 1281 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 PPP4R4Q6NUP7 873 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 PIK3AP1Q6ZUJ8 805 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 ADGRF4Q8IZF3 695 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 B4GALNT2Q8NHY0 566 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 BCAS4Q8TDM0 211 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 IPCEF1Q8WWN9 437 aaPredicted RBP2.68□□□□□ -1.98
PDGFC-208ENST00000512711 AKAP1Q92667 903 aaKnown RBP eCLIP2.68□□□□□ -1.98
PDGFC-208ENST00000512711 GJA10Q969M2 543 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 EME1Q96AY2 570 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 ELOVL1Q9BW60 279 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 UNKQ9C0B0 810 aaKnown RBP2.68□□□□□ -1.98
PDGFC-208ENST00000512711 NUP62CLQ9H1M0 184 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 HEYLQ9NQ87 328 aaPredicted RBP2.68□□□□□ -1.98
PDGFC-208ENST00000512711 TCEAL9Q9UHQ7 104 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 CNTNAP2Q9UHC6 1331 aa2.68□□□□□ -1.98
PDGFC-208ENST00000512711 TCF20Q9UGU0 1960 aaKnown RBP2.67□□□□□ -1.98
PDGFC-208ENST00000512711 POM121BA6NF01 834 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 A6NNC1 897 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 RHPN2P1A8MT19 583 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 ZSCAN9O15535 394 aaPredicted RBP2.67□□□□□ -1.98
PDGFC-208ENST00000512711 CTIFO43310 598 aaKnown RBP2.67□□□□□ -1.98
PDGFC-208ENST00000512711 PQBP1O60828 265 aaKnown RBP2.67□□□□□ -1.98
PDGFC-208ENST00000512711 COQ9O75208 318 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 KAT7O95251 611 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 NDST3O95803 873 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms