RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 IGSF5Q9NSI5 407 aa13.64□□□□□ -0.23
DEPDC1B-206ENST00000512452 TPX2Q9ULW0 747 aaKnown RBP13.64□□□□□ -0.23
DEPDC1B-206ENST00000512452 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
DEPDC1B-206ENST00000512452 TSC2P49815 1807 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 SGK1O00141 431 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 APOL1O14791 398 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 SHOX2O60902 331 aaPredicted RBP13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 ATP2C2O75185 946 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 TCEA3O75764 348 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 AP1G2O75843 785 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 B3GAT3O94766 335 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 POMCP01189 267 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 CD48P09326 243 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 ACAT1P24752 427 aaKnown RBP13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 AVPR2P30518 371 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 NR2C2P49116 596 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 ZNF135P52742 658 aaPredicted RBP13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 EIF3EP60228 445 aaKnown RBP13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 DMTNQ08495 405 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 DSC1Q08554 894 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 CBLBQ13191 982 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 XRCC4Q13426 336 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 CDO1Q16878 200 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 P3H1Q32P28 736 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 ANKRD20A8PQ5CZ79 823 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 C6orf118Q5T5N4 469 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 SH3PXD2AQ5TCZ1 1133 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 KIAA0319Q5VV43 1072 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 SCYL2Q6P3W7 929 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 CD300LGQ6UXG3 332 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 LRRC8DQ7L1W4 858 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 RNF135Q8IUD6 432 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 RNF169Q8NCN4 708 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 RSAD2Q8WXG1 361 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 P3H4Q92791 437 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 APBB2Q92870 758 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 HAUS1Q96CS2 278 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 PCED1BQ96HM7 432 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 TTC25Q96NG3 672 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 NPY6RQ99463 290 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 SEMA4AQ9H3S1 761 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 POPDC2Q9HBU9 364 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 TMEM161AQ9NX61 479 aa13.63□□□□□ -0.23
DEPDC1B-206ENST00000512452 MYBPHLA2RUH7 354 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 SRRM3A6NNA2 597 aaPredicted RBP13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 H3BQ06 376 aaPredicted RBP13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 EIF3HO15372 352 aaKnown RBP eCLIP13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 ARHGEF15O94989 841 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 PARNO95453 639 aaKnown RBP13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 TTC4O95801 387 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 ABHD2P08910 425 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 HOXB3P14651 431 aaPredicted RBP13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 IL4RP24394 825 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 TKTL1P51854 596 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 DAOAP59103 153 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 TSPY1Q01534 308 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 ROR1Q01973 937 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 GPS1Q13098 491 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 MBTPS1Q14703 1052 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 TRIP13Q15645 432 aaPredicted RBP13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 KRT71Q3SY84 523 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 NOMO2Q5JPE7 1267 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 OVOS1Q6IE37 1185 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 BZW1Q7L1Q6 419 aaKnown RBP13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 DEFB106AQ8N104 65 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 CLEC4CQ8WTT0 213 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 NTAN1Q96AB6 310 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 RTP4Q96DX8 246 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 PGAP3Q96FM1 320 aaPredicted RBP13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 PKMYT1Q99640 499 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 SMOQ99835 787 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 RTP3Q9BQQ7 232 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 ADAM7Q9H2U9 754 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 PPCSQ9HAB8 311 aa13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 TDRD15B5MCY1 1934 aaKnown RBP13.62□□□□□ -0.23
DEPDC1B-206ENST00000512452 SF3B1O75533 1304 aaKnown RBP eCLIP13.62□□□□□ -0.235e-6■■■■■ 85.6
DEPDC1B-206ENST00000512452 COL4A4P53420 1690 aaPredicted RBP13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 BCLAF3A2AJT9 711 aaKnown RBP13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 CLDN5O00501 218 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 HOXA2O43364 376 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 TRAPPC3O43617 180 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 IVLP07476 585 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 RBP3P10745 1247 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 TSHRP16473 764 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 NR1D1P20393 614 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 L1CAMP32004 1257 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 SULT1E1P49888 294 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 CDR1P51861 262 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 GYS2P54840 703 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 BCAR1P56945 870 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 MAP3K7CLP57077 242 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 DYNLT1P63172 113 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 SLC29A2Q14542 456 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 RNASEH2BQ5TBB1 312 aaKnown RBP13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 C4orf50Q6ZRC1 276 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 RTN4RL1Q86UN2 441 aaPredicted RBP13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 PPIL6Q8IXY8 311 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 PQLC3Q8N755 202 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 PLD5Q8N7P1 536 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms