RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SLC46A1Q96NT5 459 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 STRBPQ96SI9 672 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 SMOC2Q9H3U7 446 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 ALG13Q9NP73 1137 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 SLC17A6Q9P2U8 582 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 TMX2Q9Y320 296 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 RIPOR2Q9Y4F9 1068 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 PAXBP1Q9Y5B6 917 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 RAD54BQ9Y620 910 aa4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 EDC4Q6P2E9 1401 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-208ENST00000511439 MYO1CO00159 1063 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 FOXN3O00409 490 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 ORC4O43929 436 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 WDHD1O75717 1129 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 CYP19A1P11511 503 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 CYP2C9P11712 490 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 ZKSCAN1P17029 563 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 CHRM3P20309 590 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 GATA3P23771 443 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 HOXD10P28358 340 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 NEK3P51956 506 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 ZNF134P52741 427 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 WNT3P56703 355 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 KRTAP10-11P60412 298 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 IQCB1Q15051 598 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 ST3GAL2Q16842 350 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 CD300EQ496F6 205 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 SLC44A4Q53GD3 710 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 C3orf38Q5JPI3 329 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 SYCP2LQ5T4T6 812 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 MICALCLQ6ZW33 695 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 ADGRG5Q8IZF4 528 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 ACTRT2Q8TDY3 377 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 SNX19Q92543 992 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 TMEM125Q96AQ2 219 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 MOGAT1Q96PD6 335 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 AIFM2Q9BRQ8 373 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 UNKQ9C0B0 810 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 TTYH3Q9C0H2 523 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 A1CFQ9NQ94 594 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 FRMD4BQ9Y2L6 1034 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 LAMB1P07942 1786 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 CFAP47Q6ZTR5 3102 aa4.26□□□□□ -1.73
TOPBP1-208ENST00000511439 ADGRA2Q96PE1 1338 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 MED19A0JLT2 244 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 MBD3L4A6NDZ8 208 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 MBD3L3A6NE82 208 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 TMEM233B4DJY2 109 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 F8W8V4 182 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 PYCARD-AS1I3L0S3 204 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 ATXN1LP0C7T5 689 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 XRCC6P12956 609 aaKnown RBP eCLIP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 ITGALP20701 1170 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 NPTX2P47972 431 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 GCLCP48506 637 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 PRIM2P49643 509 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 CASP5P51878 434 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 RPS16P62249 146 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 IFIT5Q13325 482 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 PRKG1Q13976 671 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 PREPLQ4J6C6 727 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 ZNF362Q5T0B9 420 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 GAS2L3Q86XJ1 694 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 MPP5Q8N3R9 675 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 LNX2Q8N448 690 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 OR56A3Q8NH54 315 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 ZNF384Q8TF68 577 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 PTCD3Q96EY7 689 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 COG3Q96JB2 828 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 PDLIM2Q96JY6 352 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 DEFB118Q96PH6 123 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 TBCBQ99426 244 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 MESP1Q9BRJ9 268 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 ARHGAP39Q9C0H5 1083 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 C11orf49Q9H6J7 331 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 INTS13Q9NVM9 706 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 FOXJ2Q9P0K8 574 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 PHTF1Q9UMS5 762 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 CORO2BQ9UQ03 480 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 SNX13Q9Y5W8 968 aa4.25□□□□□ -1.73
TOPBP1-208ENST00000511439 ASTN2O75129 1339 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 TRGV11A0A075B6L2 103 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 A0A0B4J269 797 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 CCDC151A5D8V7 595 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 F5H697 171 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 TRIAP1O43715 76 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 IL18RAPO95256 599 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 MYL3P08590 195 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 PXNP49023 591 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 NDUFV1P49821 464 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 ALDH5A1P51649 535 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 AK2P54819 239 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 LOXL3P58215 753 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 RHBDL3P58872 404 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 HTRA4P83105 476 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 ZNF543Q08ER8 600 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 TUBB3Q13509 450 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 DAG1Q14118 895 aa4.24□□□□□ -1.73
TOPBP1-208ENST00000511439 DCAF12L1Q5VU92 463 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms