RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 SPATA17Q96L03 361 aa9.2□□□□□ -0.94
COL4A3BP-206ENST00000508809 CNOT6LQ96LI5 555 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-206ENST00000508809 TMEM9BQ9NQ34 198 aa9.2□□□□□ -0.94
COL4A3BP-206ENST00000508809 SEL1LQ9UBV2 794 aa9.2□□□□□ -0.94
COL4A3BP-206ENST00000508809 RALYQ9UKM9 306 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-206ENST00000508809 CELSR3Q9NYQ7 3312 aa9.2□□□□□ -0.94
COL4A3BP-206ENST00000508809 NBEAQ8NFP9 2946 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 SCO2A0A1W2PP80 73 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 C2orf78A6NCI8 922 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 H3BQV1 296 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 NFATC1O95644 943 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 ITGB3P05106 788 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 CKMP06732 381 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 GARTP22102 1010 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 ACAT1P24752 427 aaKnown RBP9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 GJB2P29033 226 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 PCSK1P29120 753 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 GBP1P32455 592 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 PDE6CP51160 858 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 IRX4P78413 519 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 MRPS21P82921 87 aaKnown RBP9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 RBP5P82980 135 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 TFAMQ00059 246 aaKnown RBP9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 PSMD2Q13200 908 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 CRY1Q16526 586 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 ZNF423Q2M1K9 1284 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 SOWAHAQ2M3V2 549 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 SPDYCQ5MJ68 293 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 EXOSC6Q5RKV6 272 aaKnown RBP9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 L1TD1Q5T7N2 865 aaKnown RBP9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 VSTM1Q6UX27 236 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 CSGALNACT2Q8N6G5 542 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 TSTD1Q8NFU3 115 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 DNAJC19Q96DA6 116 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 TMX3Q96JJ7 454 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 FAM213AQ9BRX8 229 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 TRPC7Q9HCX4 862 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 EVLQ9UI08 416 aaPredicted RBP9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 SIX4Q9UIU6 781 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 ITGA11Q9UKX5 1188 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 MMP17Q9ULZ9 603 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 INVSQ9Y283 1065 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 SNX9Q9Y5X1 595 aa9.19□□□□□ -0.94
COL4A3BP-206ENST00000508809 ANKRD11Q6UB99 2663 aaPredicted RBP9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 TMEM8BA6NDV4 472 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 ANTXRLA6NF34 631 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 MYMKA6NI61 221 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 PATE3B3GLJ2 98 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 HCRTO43612 131 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 OLFM2O95897 454 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 TOP3BO95985 862 aaKnown RBP9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 HNRNPLP14866 589 aaKnown RBP eCLIP9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 BCKDHBP21953 392 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 LMO2P25791 158 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 MAOBP27338 520 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 PPP3CCP48454 512 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 SLC7A9P82251 487 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 ZNF252P-AS1Q0IIN9 211 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 CCDC142Q17RM4 750 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 HSF5Q4G112 596 aaPredicted RBP9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 C2orf27AQ580R0 203 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 ERICH6BQ5W0A0 696 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 C4orf50Q6ZRC1 276 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 USP49Q70CQ1 688 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 DYMQ7RTS9 669 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 SFR1Q86XK3 245 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 SPATA2LQ8IUW3 424 aaPredicted RBP9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 ADGRF2Q8IZF7 708 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 GATA6Q92908 595 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 EPSTI1Q96J88 318 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 ACCSQ96QU6 501 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 FNBP1Q96RU3 617 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 TTLL2Q9BWV7 592 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 TMPRSS13Q9BYE2 586 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 RNF38Q9H0F5 515 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 KCNF1Q9H3M0 494 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 MRPL44Q9H9J2 332 aaKnown RBP9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 MAGEC2Q9UBF1 373 aaPredicted RBP9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 CDH9Q9ULB4 789 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 EXOC7Q9UPT5 735 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 LOC400499M0QZD8 3231 aa9.18□□□□□ -0.94
COL4A3BP-206ENST00000508809 KNL1Q8NG31 2342 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 ADAMTS9Q9P2N4 1935 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 FRMD3A2A2Y4 597 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 ZNF840PA6NDX5 716 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 UPK3BL1B0FP48 263 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 UPK3BL2E5RIL1 263 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 LEFTY2O00292 366 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 ATP2C2O75185 946 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 CYP17A1P05093 508 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 GAP43P17677 238 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 FSTP19883 344 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 EIF2DP41214 584 aaKnown RBP9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 P2RY2P41231 377 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 PREPP48147 710 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 NOP14P78316 857 aaKnown RBP9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 LMAN2Q12907 356 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 KCNB1Q14721 858 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 RABEP1Q15276 862 aa9.17□□□□□ -0.94
COL4A3BP-206ENST00000508809 DHCR24Q15392 516 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms