RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 SERTAD4Q9NUC0 356 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 PI4KBQ9UBF8 816 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 DKK3Q9UBP4 350 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 AMFRQ9UKV5 643 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 QSOX1O00391 747 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 CES2O00748 559 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 SEPT4O43236 478 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 ESRRBO95718 433 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 TTLL1O95922 423 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 NR2F6P10588 404 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 NDUFB7P17568 137 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 KRT4P19013 534 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 MATN1P21941 496 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 YY1P25490 414 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 PRKAA2P54646 552 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 RBM6P78332 1123 aaKnown RBP4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 MRPS35P82673 323 aaKnown RBP4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 TXNL4AP83876 142 aaKnown RBP4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 COL10A1Q03692 680 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 SF3A3Q12874 501 aaKnown RBP eCLIP4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 MPP3Q13368 585 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 BFSP2Q13515 415 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 DNASE1L3Q13609 305 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 ANKRD1Q15327 319 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 DGAT2L7PQ6IED9 249 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 Q6ZWC4 215 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 RRAGAQ7L523 313 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 LRRTM4Q86VH4 590 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 SFTPA1Q8IWL2 248 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 SLC22A17Q8WUG5 538 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 CTHRC1Q96CG8 243 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 WDYHV1Q96HA8 205 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 UNC45AQ9H3U1 944 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 KCNK9Q9NPC2 374 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 WASH6PQ9NQA3 447 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 LRIT1Q9P2V4 623 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 ZBTB1Q9Y2K1 713 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 DERAQ9Y315 318 aa4.26□□□□□ -1.73
COL4A3BP-205ENST00000508692 MBD3L5A6NJ08 208 aaPredicted RBP4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 SAC3D1A6NKF1 404 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 VWC2LB2RUY7 222 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 KIF28PB7ZC32 967 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 PRRT4C9JH25 899 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 GCOM1H8Y6P7 765 aaPredicted RBP4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 AP4M1O00189 453 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 NKX2-8O15522 239 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 HOXC11O43248 304 aaPredicted RBP4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 HNRNPRO43390 633 aaKnown RBP4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 SPRY2O43597 315 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 TSPAN3O60637 253 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 RAMP2O60895 175 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 AGR2O95994 175 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 ERBB2P04626 1255 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 NPSP0C0P6 89 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 FAM163BP0C2L3 166 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 CKMT1AP12532 417 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 CYP2C18P33260 490 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 GRIA3P42263 894 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 RBM5P52756 815 aaKnown RBP eCLIP4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 E2F1Q01094 437 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 UBE3AQ05086 875 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 TRPC3Q13507 836 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 CYP1B1Q16678 543 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 Q6ZPA2 131 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 RASGRP2Q7LDG7 609 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 FAM71DQ8N9W8 422 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 LINC00476Q8WZB0 136 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 HERVK_113Q902F9 699 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 TFAP2BQ92481 460 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 CAVIN3Q969G5 261 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 MPP4Q96JB8 637 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 MAELQ96JY0 434 aaKnown RBP4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 COG8Q96MW5 612 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 PRR25Q96S07 402 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 MLST8Q9BVC4 326 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 ZHX3Q9H4I2 956 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 CRYL1Q9Y2S2 319 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 TMEM98Q9Y2Y6 226 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 RRP7AQ9Y3A4 280 aaKnown RBP4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 FER1L4A9Z1Z3 1794 aa4.25□□□□□ -1.73
COL4A3BP-205ENST00000508692 LOC105369274A0A096LPK9 316 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 LOC102723532A0A0G2JNH3 316 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 SLC38A8A6NNN8 435 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 EPB41L2O43491 1005 aaKnown RBP4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 KRT38O76015 456 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 CNPP09543 421 aaKnown RBP4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 TMIGD3P0DMS9 266 aaPredicted RBP4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 TNNT1P13805 278 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 RXRAP19793 462 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 BMP5P22003 454 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 CTGFP29279 349 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 MCM5P33992 734 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 THBS4P35443 961 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 PCP4P48539 62 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 EEFSECP57772 596 aaKnown RBP4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 CCDC15Q0P6D6 951 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 DDX10Q13206 875 aaKnown RBP4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 SLC12A1Q13621 1099 aa4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 MAPRE1Q15691 268 aaKnown RBP4.24□□□□□ -1.73
COL4A3BP-205ENST00000508692 AAK1Q2M2I8 961 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms