RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
COL4A3BP-205ENST00000508692 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
COL4A3BP-205ENST00000508692 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
COL4A3BP-205ENST00000508692 PHF23Q9BUL5 403 aaPredicted RBP18.89■□□□□ 0.61
COL4A3BP-205ENST00000508692 FOXD1Q16676 465 aa17.93■□□□□ 0.46
COL4A3BP-205ENST00000508692 POTEDQ86YR6 584 aa16.99■□□□□ 0.31
COL4A3BP-205ENST00000508692 MSH5O43196 834 aa16.84■□□□□ 0.29
COL4A3BP-205ENST00000508692 PIAS4Q8N2W9 510 aaPredicted RBP16.68■□□□□ 0.26
COL4A3BP-205ENST00000508692 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
COL4A3BP-205ENST00000508692 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
COL4A3BP-205ENST00000508692 ADRA2BP18089 450 aa16.49■□□□□ 0.23
COL4A3BP-205ENST00000508692 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
COL4A3BP-205ENST00000508692 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
COL4A3BP-205ENST00000508692 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
COL4A3BP-205ENST00000508692 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
COL4A3BP-205ENST00000508692 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
COL4A3BP-205ENST00000508692 PPP4R3CPQ6ZMV5 832 aa14.56□□□□□ -0.08
COL4A3BP-205ENST00000508692 HOXD11P31277 338 aaPredicted RBP14.47□□□□□ -0.09
COL4A3BP-205ENST00000508692 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
COL4A3BP-205ENST00000508692 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
COL4A3BP-205ENST00000508692 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
COL4A3BP-205ENST00000508692 C1QBPQ07021 282 aaKnown RBP14.11□□□□□ -0.15
COL4A3BP-205ENST00000508692 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
COL4A3BP-205ENST00000508692 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
COL4A3BP-205ENST00000508692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL4A3BP-205ENST00000508692 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
COL4A3BP-205ENST00000508692 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
COL4A3BP-205ENST00000508692 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
COL4A3BP-205ENST00000508692 CAPN15O75808 1086 aa13.38□□□□□ -0.27
COL4A3BP-205ENST00000508692 DSG3P32926 999 aa13.36□□□□□ -0.27
COL4A3BP-205ENST00000508692 POTEHQ6S545 545 aa13.24□□□□□ -0.29
COL4A3BP-205ENST00000508692 KCNA4P22459 653 aa13.23□□□□□ -0.29
COL4A3BP-205ENST00000508692 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
COL4A3BP-205ENST00000508692 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
COL4A3BP-205ENST00000508692 ABCB7O75027 752 aa13.08□□□□□ -0.32
COL4A3BP-205ENST00000508692 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
COL4A3BP-205ENST00000508692 APLP2Q06481 763 aa13□□□□□ -0.33
COL4A3BP-205ENST00000508692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
COL4A3BP-205ENST00000508692 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
COL4A3BP-205ENST00000508692 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
COL4A3BP-205ENST00000508692 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
COL4A3BP-205ENST00000508692 POLA2Q14181 598 aa12.68□□□□□ -0.38
COL4A3BP-205ENST00000508692 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
COL4A3BP-205ENST00000508692 CHRDL2Q6WN34 429 aa12.6□□□□□ -0.39
COL4A3BP-205ENST00000508692 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
COL4A3BP-205ENST00000508692 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
COL4A3BP-205ENST00000508692 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
COL4A3BP-205ENST00000508692 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
COL4A3BP-205ENST00000508692 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
COL4A3BP-205ENST00000508692 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
COL4A3BP-205ENST00000508692 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
COL4A3BP-205ENST00000508692 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
COL4A3BP-205ENST00000508692 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
COL4A3BP-205ENST00000508692 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
COL4A3BP-205ENST00000508692 ZBTB22O15209 634 aa12.18□□□□□ -0.46
COL4A3BP-205ENST00000508692 FXR2P51116 673 aaKnown RBP eCLIP12.1□□□□□ -0.47
COL4A3BP-205ENST00000508692 HAX1O00165 279 aa12.09□□□□□ -0.47
COL4A3BP-205ENST00000508692 ATXN8OSP0DMR3 200 aa11.99□□□□□ -0.49
COL4A3BP-205ENST00000508692 EVX2Q03828 476 aa11.97□□□□□ -0.49
COL4A3BP-205ENST00000508692 SPDYE2BA6NHP3 402 aa11.95□□□□□ -0.5
COL4A3BP-205ENST00000508692 SPDYE6P0CI01 402 aa11.95□□□□□ -0.5
COL4A3BP-205ENST00000508692 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
COL4A3BP-205ENST00000508692 FBLN2P98095 1184 aa11.94□□□□□ -0.5
COL4A3BP-205ENST00000508692 MKRN4PQ13434 485 aaPredicted RBP11.87□□□□□ -0.51
COL4A3BP-205ENST00000508692 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
COL4A3BP-205ENST00000508692 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
COL4A3BP-205ENST00000508692 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
COL4A3BP-205ENST00000508692 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
COL4A3BP-205ENST00000508692 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
COL4A3BP-205ENST00000508692 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
COL4A3BP-205ENST00000508692 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
COL4A3BP-205ENST00000508692 GABBR2O75899 941 aa11.64□□□□□ -0.55
COL4A3BP-205ENST00000508692 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL4A3BP-205ENST00000508692 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
COL4A3BP-205ENST00000508692 LHX8Q68G74 356 aa11.51□□□□□ -0.57
COL4A3BP-205ENST00000508692 CD44P16070 742 aaKnown RBP11.46□□□□□ -0.57
COL4A3BP-205ENST00000508692 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
COL4A3BP-205ENST00000508692 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
COL4A3BP-205ENST00000508692 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
COL4A3BP-205ENST00000508692 CSRNP3Q8WYN3 585 aa11.32□□□□□ -0.6
COL4A3BP-205ENST00000508692 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
COL4A3BP-205ENST00000508692 CLCN6P51797 869 aa11.25□□□□□ -0.61
COL4A3BP-205ENST00000508692 ZNF579Q8NAF0 562 aaKnown RBP11.25□□□□□ -0.61
COL4A3BP-205ENST00000508692 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
COL4A3BP-205ENST00000508692 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
COL4A3BP-205ENST00000508692 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
COL4A3BP-205ENST00000508692 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
COL4A3BP-205ENST00000508692 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
COL4A3BP-205ENST00000508692 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
COL4A3BP-205ENST00000508692 POTEB2H3BUK9 544 aa11.05□□□□□ -0.64
COL4A3BP-205ENST00000508692 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
COL4A3BP-205ENST00000508692 PLSCR2Q9NRY7 297 aa11.05□□□□□ -0.64
COL4A3BP-205ENST00000508692 OTUD5Q96G74 571 aa11.04□□□□□ -0.64
COL4A3BP-205ENST00000508692 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
COL4A3BP-205ENST00000508692 PELP1Q8IZL8 1130 aaKnown RBP10.99□□□□□ -0.65
COL4A3BP-205ENST00000508692 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL4A3BP-205ENST00000508692 MS4A3Q96HJ5 214 aa10.93□□□□□ -0.66
COL4A3BP-205ENST00000508692 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
COL4A3BP-205ENST00000508692 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
COL4A3BP-205ENST00000508692 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms