RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 PBX3P40426 434 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 TRDNQ13061 729 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 FOXE3Q13461 319 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 GBX1Q14549 363 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 RARS2Q5T160 578 aaKnown RBP8.39□□□□□ -1.07
PFDN1-202ENST00000507185 BROXQ5VW32 411 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 TRMT1LQ7Z2T5 733 aaKnown RBP8.39□□□□□ -1.07
PFDN1-202ENST00000507185 RTN4RL1Q86UN2 441 aaPredicted RBP8.39□□□□□ -1.07
PFDN1-202ENST00000507185 CMIPQ8IY22 773 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 UBALD2Q8IYN6 164 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 TDRD5Q8NAT2 981 aaKnown RBP8.39□□□□□ -1.07
PFDN1-202ENST00000507185 COLGALT1Q8NBJ5 622 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 SUSD6Q92537 303 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 ADAM2Q99965 735 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 NELFAQ9H3P2 528 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 ATP6V0A4Q9HBG4 840 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 SEC63Q9UGP8 760 aaKnown RBP8.39□□□□□ -1.07
PFDN1-202ENST00000507185 SORCS3Q9UPU3 1222 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 HS3ST3A1Q9Y663 406 aa8.39□□□□□ -1.07
PFDN1-202ENST00000507185 COL4A6Q14031 1691 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 RRN3P2A6NIE6 340 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 HIDE1A8MVS5 230 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 TGM5O43548 720 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 SH3BP5O60239 455 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 PCDHGA12O60330 932 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 ATP9AO75110 1047 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 RPS6KA5O75582 802 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 FOSP01100 380 aaPredicted RBP8.38□□□□□ -1.07
PFDN1-202ENST00000507185 LAG3P18627 525 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 HMGA2P52926 109 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 ALDH6A1Q02252 535 aaKnown RBP8.38□□□□□ -1.07
PFDN1-202ENST00000507185 KRT17Q04695 432 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 UBE3AQ05086 875 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 GRM4Q14833 912 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 PLCB4Q15147 1175 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 ARHGAP29Q52LW3 1261 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 MARCH8Q5T0T0 291 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 CYB5R4Q7L1T6 521 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 CASP10Q92851 521 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 EXTL1Q92935 676 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 E2F7Q96AV8 911 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 RRP36Q96EU6 259 aaKnown RBP8.38□□□□□ -1.07
PFDN1-202ENST00000507185 CDHR1Q96JP9 859 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 POMKQ9H5K3 350 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 MKS1Q9NXB0 559 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 PLA2G3Q9NZ20 509 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 PCDHGA9Q9Y5G4 932 aaKnown RBP8.38□□□□□ -1.07
PFDN1-202ENST00000507185 PCDHGA8Q9Y5G5 932 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 PCDHGA7Q9Y5G6 932 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 PCDHGA6Q9Y5G7 932 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 PCDHGA3Q9Y5H0 932 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 PCDHGA2Q9Y5H1 932 aa8.38□□□□□ -1.07
PFDN1-202ENST00000507185 ZFHX2Q9C0A1 2572 aaPredicted RBP8.38□□□□□ -1.07
PFDN1-202ENST00000507185 TRIP12Q14669 1992 aaPredicted RBP8.37□□□□□ -1.07
PFDN1-202ENST00000507185 GSTTP1A0A1W2PQM5 241 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 PROB1E7EW31 1015 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 DDX39AO00148 427 aaKnown RBP8.37□□□□□ -1.07
PFDN1-202ENST00000507185 SLC26A4O43511 780 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 MAFO75444 373 aaPredicted RBP8.37□□□□□ -1.07
PFDN1-202ENST00000507185 MSX2P35548 267 aaPredicted RBP8.37□□□□□ -1.07
PFDN1-202ENST00000507185 NBL1P41271 181 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 KIF11P52732 1056 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 GHRHRQ02643 423 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 HGFACQ04756 655 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 FOXL1Q12952 345 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 GTF2H3Q13889 308 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 MORC3Q14149 939 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 GALEQ14376 348 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 WTAPQ15007 396 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 UBE2SQ16763 222 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 SYCE2Q6PIF2 218 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 DGLUCYQ7Z3D6 616 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 CATIPQ7Z7H3 387 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 KIAA2013Q8IYS2 634 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 C12orf76Q8N812 135 aaPredicted RBP8.37□□□□□ -1.07
PFDN1-202ENST00000507185 ATP8B4Q8TF62 1192 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 MRPS27Q92552 414 aaKnown RBP8.37□□□□□ -1.07
PFDN1-202ENST00000507185 TNPO1Q92973 898 aaKnown RBP8.37□□□□□ -1.07
PFDN1-202ENST00000507185 FOXRED1Q96CU9 486 aaPredicted RBP8.37□□□□□ -1.07
PFDN1-202ENST00000507185 HSPBAP1Q96EW2 488 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 ZNF558Q96NG5 402 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 SCLT1Q96NL6 688 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 FOXB1Q99853 325 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 SENP7Q9BQF6 1050 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 SDF4Q9BRK5 362 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 S1PR5Q9H228 398 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 DAAM1Q9Y4D1 1078 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 TECTAO75443 2155 aa8.37□□□□□ -1.07
PFDN1-202ENST00000507185 USP34Q70CQ2 3546 aa8.36□□□□□ -1.07
PFDN1-202ENST00000507185 SALL3Q9BXA9 1300 aa8.36□□□□□ -1.07
PFDN1-202ENST00000507185 IGSF9BQ9UPX0 1349 aa8.36□□□□□ -1.07
PFDN1-202ENST00000507185 MBLAC1A4D2B0 266 aaPredicted RBP8.36□□□□□ -1.07
PFDN1-202ENST00000507185 CYTH3O43739 400 aa8.36□□□□□ -1.07
PFDN1-202ENST00000507185 MGEA5O60502 916 aa8.36□□□□□ -1.07
PFDN1-202ENST00000507185 IL33O95760 270 aa8.36□□□□□ -1.07
PFDN1-202ENST00000507185 SLPIP03973 132 aa8.36□□□□□ -1.07
PFDN1-202ENST00000507185 RPLP2P05387 115 aaKnown RBP8.36□□□□□ -1.07
PFDN1-202ENST00000507185 KCNA2P16389 499 aa8.36□□□□□ -1.07
PFDN1-202ENST00000507185 HOXB8P17481 243 aaPredicted RBP8.36□□□□□ -1.07
PFDN1-202ENST00000507185 FNTBP49356 437 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms