RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 PCSK5Q92824 1860 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 FAM90A18PA6NE21 464 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 FAM90A16PA6NEW6 464 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 FAM90A9PA6NNJ1 464 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 FAM90A5PA8MXJ8 464 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 CLIC1O00299 241 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 ACKR2O00590 384 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 FYB1O15117 783 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 PPFIA2O75334 1257 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 FAM90A15PP0C7V4 464 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 FAM90A14PP0C7W9 464 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 ALADP13716 330 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 ZNF37AP17032 561 aaPredicted RBP3.35□□□□□ -1.87
GYPB-207ENST00000506679 MMP8P22894 467 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 YY1P25490 414 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 KLRK1P26718 216 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 IGHMBP2P38935 993 aaKnown RBP3.35□□□□□ -1.87
GYPB-207ENST00000506679 JAK3P52333 1124 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 PNLIPRP1P54315 467 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 C21orf58P58505 322 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 WDR5P61964 334 aaKnown RBP3.35□□□□□ -1.87
GYPB-207ENST00000506679 FOXF2Q12947 444 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 SEMA3BQ13214 749 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 OS9Q13438 667 aaPredicted RBP3.35□□□□□ -1.87
GYPB-207ENST00000506679 BLMHQ13867 455 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 MFSD13AQ14CX5 517 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 SEC23BQ15437 767 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 ERAP2Q6P179 960 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 TMEM65Q6PI78 240 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 C16orf89Q6UX73 402 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 SERPINA13PQ6UXR4 307 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 ZNF813Q6ZN06 617 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 TRABD2AQ86V40 505 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 NRSN1Q8IZ57 195 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 FAM71DQ8N9W8 422 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 PNLDC1Q8NA58 520 aaKnown RBP3.35□□□□□ -1.87
GYPB-207ENST00000506679 OR52L2PQ8NGH6 319 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.35□□□□□ -1.87
GYPB-207ENST00000506679 NPIPB3Q92617 1050 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 CCDC17Q96LX7 622 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 ARPC5LQ9BPX5 153 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 GATA5Q9BWX5 397 aaPredicted RBP3.35□□□□□ -1.87
GYPB-207ENST00000506679 SEMA4CQ9C0C4 833 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 CDCP1Q9H5V8 836 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 EPS8L2Q9H6S3 715 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 USP29Q9HBJ7 922 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 NFU1Q9UMS0 254 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 UBE2J1Q9Y385 318 aaPredicted RBP3.35□□□□□ -1.87
GYPB-207ENST00000506679 PCDHB2Q9Y5E7 798 aa3.35□□□□□ -1.87
GYPB-207ENST00000506679 C16orf96A6NNT2 1141 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 TRIM38O00635 465 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 DNPH1O43598 174 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 GCATO75600 419 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 RPP40O75818 363 aaKnown RBP3.34□□□□□ -1.87
GYPB-207ENST00000506679 TUBB4AP04350 444 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 SFPQP23246 707 aaKnown RBP eCLIP3.34□□□□□ -1.87
GYPB-207ENST00000506679 CERS1P27544 350 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 GSTM5P46439 218 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 CDK7P50613 346 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 GRM1Q13255 1194 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 SLC14A1Q13336 389 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 GAB1Q13480 694 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 BFSP2Q13515 415 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 CERKLQ49MI3 558 aaPredicted RBP3.34□□□□□ -1.87
GYPB-207ENST00000506679 TMEM119Q4V9L6 283 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 AWAT1Q58HT5 328 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 MEX3CQ5U5Q3 659 aaKnown RBP3.34□□□□□ -1.87
GYPB-207ENST00000506679 VSTM1Q6UX27 236 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 KYAT3Q6YP21 454 aaKnown RBP3.34□□□□□ -1.87
GYPB-207ENST00000506679 SRRM1Q8IYB3 904 aaKnown RBP3.34□□□□□ -1.87
GYPB-207ENST00000506679 LAS2Q8IYD9 372 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 ATG16L2Q8NAA4 619 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 SLC22A17Q8WUG5 538 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 WDR60Q8WVS4 1066 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 IGFBPL1Q8WX77 278 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 MCRS1Q96EZ8 462 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 MAGEH1Q9H213 219 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 PTPRHQ9HD43 1115 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 PRDM8Q9NQV8 689 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 ADARB2Q9NS39 739 aaKnown RBP3.34□□□□□ -1.87
GYPB-207ENST00000506679 DACT1Q9NYF0 836 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 ZBTB1Q9Y2K1 713 aa3.34□□□□□ -1.87
GYPB-207ENST00000506679 SETD1BQ9UPS6 1966 aaKnown RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 TMEM232C9JQI7 657 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 IFRD1O00458 451 aaPredicted RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 PRYO14603 147 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 NKX2-8O15522 239 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 CER1O95813 267 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 CELA2AP08217 269 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 ITGA2BP08514 1039 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 CYP2D6P10635 497 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 NDUFS1P28331 727 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 THBS4P35443 961 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 HOXD12P35452 270 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 TRAPPC10P48553 1259 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 ZNF84P51523 738 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 SSBP2P81877 361 aaPredicted RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 CCDC142Q17RM4 750 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 AAK1Q2M2I8 961 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 CCDC38Q502W7 563 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms