RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 HOOK3Q86VS8 718 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 BCL7CQ8WUZ0 217 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 LPPQ93052 612 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 NKD2Q969F2 451 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ATG4CQ96DT6 458 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TRMT2BQ96GJ1 504 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ANKRD36BP1Q96IX9 119 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ZPBPQ9BS86 351 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 WASH6PQ9NQA3 447 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TOPORSQ9NS56 1045 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 PAQR5Q9NXK6 330 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 SLC39A1Q9NY26 324 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 EXTL2Q9UBQ6 330 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ZMYND8Q9ULU4 1186 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 BPTFQ12830 3046 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 RPTORQ8N122 1335 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TRAV20A0A0B4J274 112 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF233A6NK53 670 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ATG13O75143 517 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TOMM70O94826 608 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 NDST3O95803 873 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CHRNA1P02708 482 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ASGR2P07307 311 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 H2AFB1P0C5Y9 115 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 H2AFB2P0C5Z0 115 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 HOXD8P13378 290 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 PAX1P15863 534 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 PRKACBP22694 351 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CRABP2P29373 138 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TYK2P29597 1187 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 HMOX2P30519 316 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 GGCXP38435 758 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 MXI1P50539 228 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 RBL2Q08999 1139 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 PCSK7Q16549 785 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 NT5DC1Q5TFE4 455 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 C12orf60Q5U649 245 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 POTEGQ6S5H5 508 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 IDO2Q6ZQW0 420 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 NLRC3Q7RTR2 1065 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 SFR1Q86XK3 245 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ZC3H3Q8IXZ2 948 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 C16orf71Q8IYS4 520 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TTLL6Q8N841 843 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CLRN3Q8NCR9 226 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF461Q8TAF7 563 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 MUL1Q969V5 352 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF560Q96MR9 790 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 RANBP9Q96S59 729 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 STRBPQ96SI9 672 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TRAF4Q9BUZ4 470 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ACAD9Q9H845 621 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 PLK2Q9NYY3 685 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 LAMP5Q9UJQ1 280 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CHTOPQ9Y3Y2 248 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 DMRT1Q9Y5R6 373 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 GPC6Q9Y625 555 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CCDC169A6NNP5 214 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 B8ZZF3 427 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PSMD14O00487 310 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 OR5F1O95221 314 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 BRAFP15056 766 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF18P17022 549 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 GNAT2P19087 354 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SLC5A2P31639 672 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 GNL1P36915 607 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 IL15P40933 162 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF135P52742 658 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 APBA1Q02410 837 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TUSC3Q13454 348 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 RASGRF1Q13972 1273 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 KCNAB1Q14722 419 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 DLGAP5Q15398 846 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 NFE2Q16621 373 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 WDR72Q3MJ13 1102 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 KCTD20Q7Z5Y7 419 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF589Q86UQ0 364 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PPIL6Q8IXY8 311 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 NINJ1Q92982 152 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 C12orf42Q96LP6 360 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PANX2Q96RD6 677 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CITED4Q96RK1 184 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 FNBP1Q96RU3 617 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ZIC5Q96T25 663 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 P2RX7Q99572 595 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 INTS2Q9H0H0 1204 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 RNPEPL1Q9HAU8 725 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 LRCH1Q9Y2L9 728 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 NOC2LQ9Y3T9 749 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PITPNM2Q9BZ72 1349 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 GSG1L2A8MUP6 293 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ZBTB42B2RXF5 422 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 F8W8V4 182 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 RNF103O00237 685 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHGA12O60330 932 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 UFL1O94874 794 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TFAP2AP05549 437 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 NQO1P15559 274 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 HOXA7P31268 230 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms