RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 SHC4Q6S5L8 630 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 LAYNQ6UX15 382 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 UNC93AQ86WB7 457 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 CYB5D2Q8WUJ1 264 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 TWNKQ96RR1 684 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 NUP58Q9BVL2 599 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 NT5C1AQ9BXI3 368 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 DCLK3Q9C098 648 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 ZDHHC5Q9C0B5 715 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 MKRN2Q9H000 416 aaKnown RBP8.66□□□□□ -1.02
SNF8-204ENST00000506104 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.66□□□□□ -1.02
SNF8-204ENST00000506104 MARK1Q9P0L2 795 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 MARCH2Q9P0N8 246 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 CGNQ9P2M7 1197 aaKnown RBP8.66□□□□□ -1.02
SNF8-204ENST00000506104 PCOLCE2Q9UKZ9 415 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 ZNF510Q9Y2H8 683 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 GPSM3Q9Y4H4 160 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 PCDHA5Q9Y5H7 936 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 CFAP47Q6ZTR5 3102 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 LAMA1P25391 3075 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 CKAP5Q14008 2032 aa8.66□□□□□ -1.02
SNF8-204ENST00000506104 PVALEFA0A1B0GWK0 134 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 METTL12A8MUP2 240 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 CALUO43852 315 aaPredicted RBP8.65□□□□□ -1.02
SNF8-204ENST00000506104 PPP6R2O75170 966 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 PYGBP11216 843 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 ASPAP45381 313 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 GCLMP48507 274 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 VAMP7P51809 220 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 MFAP3P55082 362 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 COG7P83436 770 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 KMT5BQ4FZB7 885 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.02
SNF8-204ENST00000506104 IL27RAQ6UWB1 636 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 CCNI2Q6ZMN8 369 aaPredicted RBP8.65□□□□□ -1.02
SNF8-204ENST00000506104 SV2AQ7L0J3 742 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 CRYBG2Q8N1P7 616 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 ENGASEQ8NFI3 743 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 TAF4BQ92750 862 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 CCDC47Q96A33 483 aaKnown RBP8.65□□□□□ -1.02
SNF8-204ENST00000506104 HNRNPABQ99729 332 aaKnown RBP8.65□□□□□ -1.02
SNF8-204ENST00000506104 ARID3AQ99856 593 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 GZF1Q9H116 711 aaPredicted RBP8.65□□□□□ -1.02
SNF8-204ENST00000506104 LHX5Q9H2C1 402 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 C6orf106Q9H6K1 298 aaPredicted RBP8.65□□□□□ -1.02
SNF8-204ENST00000506104 MAGEF1Q9HAY2 307 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 SLC24A3Q9HC58 644 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 CSNK1G1Q9HCP0 422 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 CYLDQ9NQC7 956 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 ITM2CQ9NQX7 267 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 IL37Q9NZH6 218 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 THAP10Q9P2Z0 257 aaPredicted RBP8.65□□□□□ -1.02
SNF8-204ENST00000506104 AGO1Q9UL18 857 aaKnown RBP8.65□□□□□ -1.02
SNF8-204ENST00000506104 CLEC4EQ9ULY5 219 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 MAPK8IP1Q9UQF2 711 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 BTBD3Q9Y2F9 522 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 SNX11Q9Y5W9 270 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 PLXNA2O75051 1894 aa8.65□□□□□ -1.02
SNF8-204ENST00000506104 KNL1Q8NG31 2342 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 URB1O60287 2271 aaKnown RBP8.64□□□□□ -1.03
SNF8-204ENST00000506104 TRABD2BA6NFA1 517 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 HHLA1C9JL84 531 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 FLRT2O43155 660 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 GREM1O60565 184 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 GJB3O75712 270 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 YEATS4O95619 227 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 KLKB1P03952 638 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 DNTTP04053 509 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 PRR29P0C7W0 189 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 PDIA4P13667 645 aaKnown RBP8.64□□□□□ -1.03
SNF8-204ENST00000506104 PSEN1P49768 467 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 KIF11P52732 1056 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 C21orf59P57076 290 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 SLC8A3P57103 927 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 YWHAGP61981 247 aaKnown RBP eCLIP8.64□□□□□ -1.03
SNF8-204ENST00000506104 STK4Q13043 487 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 E2F5Q15329 346 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 KIF19Q2TAC6 998 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 ZACNQ401N2 412 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 SOWAHCQ53LP3 525 aaPredicted RBP8.64□□□□□ -1.03
SNF8-204ENST00000506104 PRAMEF14Q5SWL7 426 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 FYB2Q5VWT5 728 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 Q6ZNB5 142 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 CHST9Q7L1S5 443 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 SCD5Q86SK9 330 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 C12orf56Q8IXR9 622 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 CADM4Q8NFZ8 388 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 OR2T3Q8NH03 318 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 PIP4K2CQ8TBX8 421 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 RNF139Q8WU17 664 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 NDRG1Q92597 394 aaKnown RBP8.64□□□□□ -1.03
SNF8-204ENST00000506104 CDK5RAP1Q96SZ6 601 aaKnown RBP8.64□□□□□ -1.03
SNF8-204ENST00000506104 CDC6Q99741 560 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 DUSP16Q9BY84 665 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 VRTNQ9H8Y1 702 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 ELOVL2Q9NXB9 296 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 STIM2Q9P246 746 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 USP36Q9P275 1121 aaKnown RBP8.64□□□□□ -1.03
SNF8-204ENST00000506104 SFMBT1Q9UHJ3 866 aa8.64□□□□□ -1.03
SNF8-204ENST00000506104 PCDHA7Q9UN72 937 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms