RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 TSTD1Q8NFU3 115 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 OLIG1Q8TAK6 271 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 ATP2A3Q93084 1043 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 CCDC42Q96M95 316 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 HNRNPABQ99729 332 aaKnown RBP16.49■□□□□ 0.23
PDCD6-203ENST00000505526 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDCD6-203ENST00000505526 TPSD1Q9BZJ3 242 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 DEF6Q9H4E7 631 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 UXTQ9UBK9 157 aaPredicted RBP16.49■□□□□ 0.23
PDCD6-203ENST00000505526 PCDHGC3Q9UN70 934 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 WNT6Q9Y6F9 365 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 ZNF638Q14966 1978 aaKnown RBP16.49■□□□□ 0.23
PDCD6-203ENST00000505526 IGF2RP11717 2491 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 OBSL1O75147 1896 aa16.49■□□□□ 0.23
PDCD6-203ENST00000505526 SSU72P8A0A1W2PR75 194 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 TMEM8BA6NDV4 472 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 SOWAHDA6NJG2 315 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 PATE3B3GLJ2 98 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 M0QYV0 167 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 CDX4O14627 284 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-203ENST00000505526 IFNAR2P48551 515 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-203ENST00000505526 ZNF77Q15935 545 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 DDR2Q16832 855 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 DENND1BQ6P3S1 775 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 FAM35AQ86V20 835 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 VPS36Q86VN1 386 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 CCDC112Q8NEF3 446 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 CCDC26Q8TAB7 109 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 UBA3Q8TBC4 463 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 CYP2S1Q96SQ9 504 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 PCDHB18PQ96TA0 734 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 ZNF518BQ9C0D4 1074 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 TRPC7Q9HCX4 862 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 HESX1Q9UBX0 185 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 ADAMTS1Q9UHI8 967 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 ZZEF1O43149 2961 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 FAM170AA1A519 330 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 DDX3XO00571 662 aaKnown RBP eCLIP16.48■□□□□ 0.235e-13■■■■□ 26.2
PDCD6-203ENST00000505526 AKR1B10O60218 316 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 TADA3O75528 432 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 USP17L7P0C7H9 530 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 HOXB3P14651 431 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-203ENST00000505526 BDNFP23560 247 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 RPL10AP62906 217 aaKnown RBP16.48■□□□□ 0.23
PDCD6-203ENST00000505526 CCZ1BP86790 482 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 CCZ1P86791 482 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-203ENST00000505526 NR1H3Q13133 447 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 EML3Q32P44 896 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 CYP2U1Q7Z449 544 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 TTC30AQ86WT1 665 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 ANKRD52Q8NB46 1076 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 TRMT2BQ96GJ1 504 aaKnown RBP16.48■□□□□ 0.23
PDCD6-203ENST00000505526 ZNF830Q96NB3 372 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-203ENST00000505526 SLC22A12Q96S37 553 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 SCNM1Q9BWG6 230 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 KRT82Q9NSB4 513 aa16.48■□□□□ 0.23
PDCD6-203ENST00000505526 ATP8B3O60423 1300 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 KIAA1549LQ6ZVL6 1849 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 A0A087X0T9 212 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 TRAV19A0A0A6YYK7 116 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 NRDCO43847 1150 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 AP1G2O75843 785 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 CKMP06732 381 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 FAM228BP0C875 321 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 FAM200BP0CF97 657 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 BCKDHBP21953 392 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 CYP2F1P24903 491 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 ANXA13P27216 316 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 KIF11P52732 1056 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 IRX4P78413 519 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 GFPT1Q06210 699 aaPredicted RBP16.47■□□□□ 0.23
PDCD6-203ENST00000505526 USP4Q13107 963 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 ASTE1Q2TB18 679 aaPredicted RBP16.47■□□□□ 0.23
PDCD6-203ENST00000505526 UAP1L1Q3KQV9 507 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 CFAP221Q4G0U5 840 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 RAD9BQ6WBX8 426 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 TRIM72Q6ZMU5 477 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 RASSF3Q86WH2 238 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 SLC30A5Q8TAD4 765 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 USP33Q8TEY7 942 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 GATA6Q92908 595 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 SMARCD1Q96GM5 515 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 FUBP3Q96I24 572 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDCD6-203ENST00000505526 MYRFLQ96LU7 910 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 KCNF1Q9H3M0 494 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 CEP83Q9Y592 693 aa16.47■□□□□ 0.23
PDCD6-203ENST00000505526 ZFYVE26Q68DK2 2539 aa16.46■□□□□ 0.23
PDCD6-203ENST00000505526 LSM8O95777 96 aaKnown RBP16.46■□□□□ 0.23
PDCD6-203ENST00000505526 CYP1A1P04798 512 aaPredicted RBP16.46■□□□□ 0.23
PDCD6-203ENST00000505526 CYLC1P35663 651 aaPredicted RBP16.46■□□□□ 0.23
PDCD6-203ENST00000505526 DHPSP49366 369 aaPredicted RBP16.46■□□□□ 0.23
PDCD6-203ENST00000505526 CACNA2D1P54289 1103 aa16.46■□□□□ 0.23
PDCD6-203ENST00000505526 BCAT1P54687 386 aa16.46■□□□□ 0.23
PDCD6-203ENST00000505526 SEC13P55735 322 aa16.46■□□□□ 0.23
PDCD6-203ENST00000505526 PDE4CQ08493 712 aa16.46■□□□□ 0.23
PDCD6-203ENST00000505526 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.23
PDCD6-203ENST00000505526 PKDCCQ504Y2 493 aa16.46■□□□□ 0.23
PDCD6-203ENST00000505526 C2orf27AQ580R0 203 aa16.46■□□□□ 0.23
PDCD6-203ENST00000505526 ANO7Q6IWH7 933 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms