RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 KLK7P49862 253 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 SEC13P55735 322 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 DAOAP59103 153 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 YWHAGP61981 247 aaKnown RBP eCLIP8.39□□□□□ -1.07
RFC1-207ENST00000504554 CETN1Q12798 172 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 EFEMP1Q12805 493 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 ARID5BQ14865 1188 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 MAN2A1Q16706 1144 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 ARHGAP44Q17R89 818 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 EXOC3L4Q17RC7 722 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 VWA3BQ502W6 1294 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 EMC10Q5UCC4 262 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 KLHDC10Q6PID8 442 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 C1orf228Q6PIY5 440 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 GBP6Q6ZN66 633 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 DDX42Q86XP3 938 aaKnown RBP eCLIP8.39□□□□□ -1.07
RFC1-207ENST00000504554 ETFBKMTQ8IXQ9 262 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 ZNF276Q8N554 614 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 WDTC1Q8N5D0 677 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 KIAA1958Q8N8K9 716 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 NAT16Q8N8M0 369 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 SUMF1Q8NBK3 374 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 RPLP0P6Q8NHW5 317 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 KCTD13Q8WZ19 329 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 EDEM1Q92611 657 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 TUBGCP2Q9BSJ2 902 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 NACA2Q9H009 215 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 HSD3B7Q9H2F3 369 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 NDST4Q9H3R1 872 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 ZDHHC4Q9NPG8 344 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 ZSCAN32Q9NX65 697 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 TAB2Q9NYJ8 693 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 TMEM63CQ9P1W3 806 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 HESX1Q9UBX0 185 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 RASAL2Q9UJF2 1139 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 DNMT3LQ9UJW3 386 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 KIAA1257Q9ULG3 409 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 SH3BP1Q9Y3L3 701 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 HELZP42694 1942 aaKnown RBP8.39□□□□□ -1.07
RFC1-207ENST00000504554 MIA3Q5JRA6 1907 aa8.39□□□□□ -1.07
RFC1-207ENST00000504554 GTPBP10A4D1E9 387 aaKnown RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 KCNJ18B7U540 433 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 FOXN3O00409 490 aaPredicted RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 SLC9A3R1O14745 358 aaPredicted RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 HOXC11O43248 304 aaPredicted RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 LETM1O95202 739 aaPredicted RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 FYNP06241 537 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 SETSIPP0DME0 302 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 DRD1P21728 446 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 CCR3P51677 355 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 KDSRQ06136 332 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 KCNJ12Q14500 433 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 NCAPHQ15003 741 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 AGERQ15109 404 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 TPD52L1Q16890 204 aaPredicted RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 CRTC2Q53ET0 693 aaPredicted RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 TCP11X2Q5H9J9 407 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 CDKAL1Q5VV42 579 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 BSPRYQ5W0U4 402 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 HEATR6Q6AI08 1181 aaKnown RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 TPGS1Q6ZTW0 290 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 SYNPOQ8N3V7 929 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 DCLK2Q8N568 766 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 ZSCAN1Q8NBB4 408 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 ENOX1Q8TC92 643 aaKnown RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 USP33Q8TEY7 942 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 ZNF606Q8WXB4 792 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 SHC3Q92529 594 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 NKD2Q969F2 451 aaPredicted RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 ITPKCQ96DU7 683 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 PIWIL1Q96J94 861 aaKnown RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 IER2Q9BTL4 223 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 NAA15Q9BXJ9 866 aaKnown RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 LRRC4Q9HBW1 653 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 SPHK2Q9NRA0 654 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 TBC1D14Q9P2M4 693 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 APEX2Q9UBZ4 518 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 SFMBT1Q9UHJ3 866 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 DNAJC12Q9UKB3 198 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 AGO1Q9UL18 857 aaKnown RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 CLEC4EQ9ULY5 219 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 NOVA2Q9UNW9 492 aaKnown RBP8.38□□□□□ -1.07
RFC1-207ENST00000504554 NFE2L3Q9Y4A8 694 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 PCDHGA2Q9Y5H1 932 aa8.38□□□□□ -1.07
RFC1-207ENST00000504554 ZFHX2Q9C0A1 2572 aaPredicted RBP8.37□□□□□ -1.07
RFC1-207ENST00000504554 A0A0A0MRY4 1105 aa8.37□□□□□ -1.07
RFC1-207ENST00000504554 SLC12A8A0AV02 714 aa8.37□□□□□ -1.07
RFC1-207ENST00000504554 FAM170AA1A519 330 aa8.37□□□□□ -1.07
RFC1-207ENST00000504554 GFRA2O00451 464 aa8.37□□□□□ -1.07
RFC1-207ENST00000504554 EPHB6O15197 1021 aa8.37□□□□□ -1.07
RFC1-207ENST00000504554 MSI1O43347 362 aaKnown RBP8.37□□□□□ -1.07
RFC1-207ENST00000504554 TULP3O75386 442 aa8.37□□□□□ -1.07
RFC1-207ENST00000504554 KAT7O95251 611 aa8.37□□□□□ -1.07
RFC1-207ENST00000504554 ZIC2O95409 532 aaPredicted RBP8.37□□□□□ -1.07
RFC1-207ENST00000504554 LMNAP02545 664 aaKnown RBP8.37□□□□□ -1.07
RFC1-207ENST00000504554 CISD3P0C7P0 127 aa8.37□□□□□ -1.07
RFC1-207ENST00000504554 RALAP11233 206 aa8.37□□□□□ -1.07
RFC1-207ENST00000504554 GNA15P30679 374 aa8.37□□□□□ -1.07
RFC1-207ENST00000504554 CORO1AP31146 461 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms