RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 KRT82Q9NSB4 513 aa9.58□□□□□ -0.88
DHFR-202ENST00000504396 TMEM30AQ9NV96 361 aa9.58□□□□□ -0.88
DHFR-202ENST00000504396 DNAAF2Q9NVR5 837 aaKnown RBP9.58□□□□□ -0.88
DHFR-202ENST00000504396 GMIPQ9P107 970 aa9.58□□□□□ -0.88
DHFR-202ENST00000504396 FBXO2Q9UK22 296 aaPredicted RBP9.58□□□□□ -0.88
DHFR-202ENST00000504396 LSM7Q9UK45 103 aaKnown RBP9.58□□□□□ -0.88
DHFR-202ENST00000504396 ZZEF1O43149 2961 aa9.58□□□□□ -0.88
DHFR-202ENST00000504396 AKAP13Q12802 2813 aa9.58□□□□□ -0.88
DHFR-202ENST00000504396 ATRXP46100 2492 aa9.58□□□□□ -0.88
DHFR-202ENST00000504396 ADAMTS20P59510 1910 aa9.58□□□□□ -0.88
DHFR-202ENST00000504396 A0A1W2PQF6 199 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 TAF4O00268 1085 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 TYRP14679 529 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 TUBP50607 506 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 SNRPFP62306 86 aaKnown RBP9.57□□□□□ -0.88
DHFR-202ENST00000504396 CENPCQ03188 943 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 GRIK2Q13002 908 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 BIRC3Q13489 604 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 SNRNP35Q16560 246 aaKnown RBP9.57□□□□□ -0.88
DHFR-202ENST00000504396 PDZD3Q86UT5 571 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 FAM35AQ86V20 835 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 SCAMP5Q8TAC9 235 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 MDM1Q8TC05 714 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 HNRNPLLQ8WVV9 542 aaKnown RBP9.57□□□□□ -0.88
DHFR-202ENST00000504396 HPS3Q969F9 1004 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 JAKMIP2Q96AA8 810 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 SMARCD1Q96GM5 515 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 CGRRF1Q99675 332 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 DMAP1Q9NPF5 467 aaPredicted RBP9.57□□□□□ -0.88
DHFR-202ENST00000504396 CD93Q9NPY3 652 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 CUEDC1Q9NWM3 386 aaPredicted RBP9.57□□□□□ -0.88
DHFR-202ENST00000504396 COMMD8Q9NX08 183 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 CACNA2D2Q9NY47 1150 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 APOBEC2Q9Y235 224 aaKnown RBP9.57□□□□□ -0.88
DHFR-202ENST00000504396 NME7Q9Y5B8 376 aa9.57□□□□□ -0.88
DHFR-202ENST00000504396 FAM221BA6H8Z2 402 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 CLIC2O15247 247 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 EIF3DO15371 548 aaKnown RBP eCLIP9.56□□□□□ -0.88
DHFR-202ENST00000504396 TLR5O60602 858 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 CST3P01034 146 aaPredicted RBP9.56□□□□□ -0.88
DHFR-202ENST00000504396 DGKGP49619 791 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 MYL6P60660 151 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 ASIC1P78348 528 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 SLC14A1Q13336 389 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 STARD3Q14849 445 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 C8orf34Q49A92 452 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 SNX30Q5VWJ9 437 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 CACUL1Q86Y37 369 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 NELFCDQ8IXH7 590 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 ZCCHC9Q8N567 271 aaKnown RBP9.56□□□□□ -0.88
DHFR-202ENST00000504396 ZSCAN1Q8NBB4 408 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 GLIS3Q8NEA6 775 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 ADAMTS14Q8WXS8 1223 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 SYAP1Q96A49 352 aaPredicted RBP9.56□□□□□ -0.88
DHFR-202ENST00000504396 SMYD3Q9H7B4 428 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 UPF2Q9HAU5 1272 aaKnown RBP9.56□□□□□ -0.88
DHFR-202ENST00000504396 ETNK1Q9HBU6 452 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.56□□□□□ -0.88
DHFR-202ENST00000504396 CACNG3O60359 315 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 NCAM1P13591 858 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 CD6P30203 668 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 ATICP31939 592 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 CDH8P55286 799 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 CYP24A1Q07973 514 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 ORC1Q13415 861 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 ZNF699Q32M78 642 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 CCDC157Q569K6 752 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 TOGARAM2Q6ZUX3 1019 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 SV2AQ7L0J3 742 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 SNX19Q92543 992 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 WBP2Q969T9 261 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 TOE1Q96GM8 510 aaKnown RBP9.56□□□□□ -0.88
DHFR-202ENST00000504396 LRIG1Q96JA1 1093 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 TNIP3Q96KP6 325 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 MRGPRX1Q96LB2 322 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 GPR174Q9BXC1 333 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 TNMDQ9H2S6 317 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 CUEDC2Q9H467 287 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 TLR8Q9NR97 1041 aaKnown RBP9.56□□□□□ -0.88
DHFR-202ENST00000504396 PLK2Q9NYY3 685 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 WDR35Q9P2L0 1181 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 RAXQ9Y2V3 346 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 STARD13Q9Y3M8 1113 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 HRH3Q9Y5N1 445 aa9.56□□□□□ -0.88
DHFR-202ENST00000504396 MYH10P35580 1976 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 GON4LQ3T8J9 2241 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 PKD1L2Q7Z442 2459 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 CACNA1EQ15878 2313 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 UBE4BO95155 1302 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 A0A087X0B3 334 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 A0A1B0GTW7 788 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 FAM92AA1XBS5 289 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 WASH3PC4AMC7 463 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 PRRT4C9JH25 899 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 SYNCRIPO60506 623 aaKnown RBP9.55□□□□□ -0.88
DHFR-202ENST00000504396 CER1O95813 267 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 CCDC130P13994 396 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 MAP3K7CLP57077 242 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 AMPD3Q01432 767 aa9.55□□□□□ -0.88
DHFR-202ENST00000504396 PSMD6Q15008 389 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms