RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CLEC4CQ8WTT0 213 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 KCTD13Q8WZ19 329 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 IPO9Q96P70 1041 aaKnown RBP17.01■□□□□ 0.31
SCLT1-204ENST00000503215 TMEM74BQ9NUR3 256 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 KIAA1257Q9ULG3 409 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 STRIP2Q9ULQ0 834 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCLT1-204ENST00000503215 ZNF510Q9Y2H8 683 aa17.01■□□□□ 0.31
SCLT1-204ENST00000503215 LNP1A1A4G5 178 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 BICDL2A1A5D9 508 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 TSPAN3O60637 253 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 SETSIPP0DME0 302 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 NDUFV2P19404 249 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 PPP1R2P41236 205 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 ZNF132P52740 706 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 DAOAP59103 153 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 CNGA2Q16280 664 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 RNF43Q68DV7 783 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 IL31Q6EBC2 164 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 FOXR2Q6PJQ5 311 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 NUDT18Q6ZVK8 323 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 LPCAT2Q7L5N7 544 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 TRMT11Q7Z4G4 463 aaKnown RBP17■□□□□ 0.31
SCLT1-204ENST00000503215 C11orf74Q86VG3 221 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 SIX6OS1Q8N1H7 587 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 SORCS1Q8WY21 1168 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 PIWIL1Q96J94 861 aaKnown RBP17■□□□□ 0.31
SCLT1-204ENST00000503215 GABRG3Q99928 467 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 DCLK3Q9C098 648 aa17■□□□□ 0.31
SCLT1-204ENST00000503215 INTS2Q9H0H0 1204 aaKnown RBP17■□□□□ 0.31
SCLT1-204ENST00000503215 ATXN2Q99700 1313 aaKnown RBP16.99■□□□□ 0.31
SCLT1-204ENST00000503215 C4orf47A7E2U8 309 aa16.99■□□□□ 0.31
SCLT1-204ENST00000503215 M0QYV0 167 aa16.99■□□□□ 0.31
SCLT1-204ENST00000503215 CHKAP35790 457 aa16.99■□□□□ 0.31
SCLT1-204ENST00000503215 APBA1Q02410 837 aa16.99■□□□□ 0.31
SCLT1-204ENST00000503215 TMEM215Q68D42 235 aa16.99■□□□□ 0.31
SCLT1-204ENST00000503215 FAM217AQ8IXS0 508 aa16.99■□□□□ 0.31
SCLT1-204ENST00000503215 EDEM2Q9BV94 578 aa16.99■□□□□ 0.31
SCLT1-204ENST00000503215 ACP6Q9NPH0 428 aa16.99■□□□□ 0.31
SCLT1-204ENST00000503215 SLC27A6Q9Y2P4 619 aa16.99■□□□□ 0.31
SCLT1-204ENST00000503215 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCLT1-204ENST00000503215 STON1Q9Y6Q2 735 aa16.99■□□□□ 0.31
SCLT1-204ENST00000503215 KHNYNO15037 678 aaKnown RBP16.98■□□□□ 0.31
SCLT1-204ENST00000503215 P4HA2O15460 535 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 AFPP02771 609 aaKnown RBP16.98■□□□□ 0.31
SCLT1-204ENST00000503215 ADRB1P08588 477 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 ITPKAP23677 461 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 SGSHP51688 502 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 MARSP56192 900 aaKnown RBP16.98■□□□□ 0.31
SCLT1-204ENST00000503215 SDE2Q6IQ49 451 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 GJB7Q6PEY0 223 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 CPXM2Q8N436 756 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 DDI1Q8WTU0 396 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 RNF139Q8WU17 664 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 PLD4Q96BZ4 506 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 SPACA7Q96KW9 195 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 MRGPRX1Q96LB2 322 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 CRACR2AQ9BSW2 395 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 FSCN3Q9NQT6 498 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 CNGB3Q9NQW8 809 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 CYP8B1Q9UNU6 501 aa16.98■□□□□ 0.31
SCLT1-204ENST00000503215 IGHV1OR15-9A0A0B4J2B8 117 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 GOLGA6L7A0A1B0GV03 622 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 GFRA2O00451 464 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 CDX4O14627 284 aaPredicted RBP16.97■□□□□ 0.31
SCLT1-204ENST00000503215 FYNP06241 537 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 IL12RB1P42701 662 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 GCNT1Q02742 428 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 DENND1BQ6P3S1 775 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 IRF2BP1Q8IU81 584 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 SCML4Q8N228 414 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 CNTNAP3BQ96NU0 1288 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 LSM14BQ9BX40 385 aaKnown RBP16.97■□□□□ 0.31
SCLT1-204ENST00000503215 CNTNAP3Q9BZ76 1288 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 MIS12Q9H081 205 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 UBE2TQ9NPD8 197 aaPredicted RBP16.97■□□□□ 0.31
SCLT1-204ENST00000503215 KIAA1468Q9P260 1216 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 THAP10Q9P2Z0 257 aaPredicted RBP16.97■□□□□ 0.31
SCLT1-204ENST00000503215 CNTN6Q9UQ52 1028 aa16.97■□□□□ 0.31
SCLT1-204ENST00000503215 HBS1LQ9Y450 684 aaKnown RBP16.97■□□□□ 0.31
SCLT1-204ENST00000503215 GNA14O95837 355 aa16.96■□□□□ 0.31
SCLT1-204ENST00000503215 KRT5P13647 590 aa16.96■□□□□ 0.31
SCLT1-204ENST00000503215 HOXD9P28356 352 aaPredicted RBP16.96■□□□□ 0.31
SCLT1-204ENST00000503215 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.31
SCLT1-204ENST00000503215 HARS2P49590 506 aaKnown RBP16.96■□□□□ 0.31
SCLT1-204ENST00000503215 RPL6Q02878 288 aaKnown RBP16.96■□□□□ 0.31
SCLT1-204ENST00000503215 CETN1Q12798 172 aa16.96■□□□□ 0.31
SCLT1-204ENST00000503215 FUT11Q495W5 492 aa16.96■□□□□ 0.31
SCLT1-204ENST00000503215 N4BP2L1Q5TBK1 243 aaPredicted RBP16.96■□□□□ 0.31
SCLT1-204ENST00000503215 MSANTD2Q6P1R3 559 aa16.96■□□□□ 0.31
SCLT1-204ENST00000503215 CREBRFQ8IUR6 639 aa16.96■□□□□ 0.31
SCLT1-204ENST00000503215 SCUBE3Q8IX30 993 aa16.96■□□□□ 0.31
SCLT1-204ENST00000503215 ABCC13Q9NSE7 274 aa16.96■□□□□ 0.31
SCLT1-204ENST00000503215 OLA1Q9NTK5 396 aaKnown RBP16.96■□□□□ 0.31
SCLT1-204ENST00000503215 ELOVL2Q9NXB9 296 aa16.96■□□□□ 0.31
SCLT1-204ENST00000503215 PILRBQ9UKJ0 227 aa16.96■□□□□ 0.31
SCLT1-204ENST00000503215 ACACBO00763 2458 aa16.95■□□□□ 0.3
SCLT1-204ENST00000503215 PI4KAP42356 2102 aa16.95■□□□□ 0.3
SCLT1-204ENST00000503215 GIPC1O14908 333 aa16.95■□□□□ 0.3
SCLT1-204ENST00000503215 CYBBP04839 570 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms