RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 CFIP05156 583 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 SETSIPP0DME0 302 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 LCP1P13796 627 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 ITPKAP23677 461 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 NOVA1P51513 510 aaKnown RBP13.55□□□□□ -0.24
FN1-226ENST00000496542 MFAP3P55082 362 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 UAP1L1Q3KQV9 507 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 PM20D1Q6GTS8 502 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 TMEM270Q6UE05 265 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 KIAA1324Q6UXG2 1013 aaKnown RBP13.55□□□□□ -0.24
FN1-226ENST00000496542 SLC36A4Q6YBV0 504 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 FMNL3Q8IVF7 1028 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 DDI1Q8WTU0 396 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 RNF139Q8WU17 664 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 NELFBQ8WX92 580 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 EDEM1Q92611 657 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 PLD4Q96BZ4 506 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 NUSAP1Q9BXS6 441 aaKnown RBP13.55□□□□□ -0.24
FN1-226ENST00000496542 CD248Q9HCU0 757 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 OLA1Q9NTK5 396 aaKnown RBP13.55□□□□□ -0.24
FN1-226ENST00000496542 TMEM74BQ9NUR3 256 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 EVLQ9UI08 416 aaPredicted RBP13.55□□□□□ -0.24
FN1-226ENST00000496542 FBXO10Q9UK96 956 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 CTNND2Q9UQB3 1225 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 SLC27A6Q9Y2P4 619 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 PCDHB4Q9Y5E5 795 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 STON1Q9Y6Q2 735 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 KNL1Q8NG31 2342 aa13.55□□□□□ -0.24
FN1-226ENST00000496542 PCNX2A6NKB5 2137 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 IGHV1OR15-9A0A0B4J2B8 117 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 YJEFN3A6XGL0 299 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 E7ENQ6 273 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 GFRA2O00451 464 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 BIN1O00499 593 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 GIPC1O14908 333 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 ZNF217O75362 1048 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 PPP1R2P41236 205 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 DPP6P42658 865 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 MAPK8P45983 427 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 RGS7P49802 495 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 LMAN2Q12907 356 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 STARD3Q14849 445 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 GEN1Q17RS7 908 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 SPDYCQ5MJ68 293 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 SH3PXD2AQ5TCZ1 1133 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 BSPRYQ5W0U4 402 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 TTI2Q6NXR4 508 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 ANKS1BQ7Z6G8 1248 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 PPM1KQ8N3J5 372 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 UCMAQ8WVF2 138 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 TFAP2BQ92481 460 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 KAT5Q92993 513 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 CD93Q9NPY3 652 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 SFMBT1Q9UHJ3 866 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 PILRBQ9UKJ0 227 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 ANGPTL2Q9UKU9 493 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 KIAA1257Q9ULG3 409 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 CLEC4EQ9ULY5 219 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 CKAP5Q14008 2032 aa13.54□□□□□ -0.24
FN1-226ENST00000496542 M0QYV0 167 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 PIK3R2O00459 728 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 CDX4O14627 284 aaPredicted RBP13.53□□□□□ -0.24
FN1-226ENST00000496542 MSI1O43347 362 aaKnown RBP13.53□□□□□ -0.24
FN1-226ENST00000496542 TSPAN3O60637 253 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 CALCAP01258 141 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 PAEPP09466 180 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 ENGP17813 658 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 BMP6P22004 513 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 BRD2P25440 801 aaKnown RBP13.53□□□□□ -0.24
FN1-226ENST00000496542 PMLP29590 882 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 IL12RB1P42701 662 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 HARS2P49590 506 aaKnown RBP13.53□□□□□ -0.24
FN1-226ENST00000496542 ZNF33AQ06730 810 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 CETN1Q12798 172 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 TRIP4Q15650 581 aaPredicted RBP13.53□□□□□ -0.24
FN1-226ENST00000496542 LCLAT1Q6UWP7 414 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 ELOA2Q8IYF1 753 aaPredicted RBP13.53□□□□□ -0.24
FN1-226ENST00000496542 CPXM2Q8N436 756 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 KCTD13Q8WZ19 329 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 PIWIL1Q96J94 861 aaKnown RBP13.53□□□□□ -0.24
FN1-226ENST00000496542 MRGPRX1Q96LB2 322 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 HSPA12BQ96MM6 686 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 CIPCQ9C0C6 399 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 FSCN3Q9NQT6 498 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 CNGB3Q9NQW8 809 aa13.53□□□□□ -0.24
FN1-226ENST00000496542 HBS1LQ9Y450 684 aaKnown RBP13.53□□□□□ -0.24
FN1-226ENST00000496542 BICDL2A1A5D9 508 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 PPP1R3GB7ZBB8 358 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 PMM2O15305 246 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.25
FN1-226ENST00000496542 NDUFS2O75306 463 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 HOXD12P35452 270 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 STX17P56962 302 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 DAOAP59103 153 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 ZNF252P-AS1Q0IIN9 211 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 MORC3Q14149 939 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 FUT11Q495W5 492 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 PKDCCQ504Y2 493 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 PMF1Q6P1K2 205 aa13.52□□□□□ -0.25
FN1-226ENST00000496542 SLC23A3Q6PIS1 610 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms