RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 TYMPP19971 482 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 STIP1P31948 543 aaKnown RBP16.91■□□□□ 0.3
CBX4-204ENST00000495122 ALDH7A1P49419 539 aaKnown RBP16.91■□□□□ 0.3
CBX4-204ENST00000495122 SCNN1GP51170 649 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 AIF1P55008 147 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 DMTNQ08495 405 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 IFFO1Q0D2I5 559 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 MORF4L2Q15014 288 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 MAPRE1Q15691 268 aaKnown RBP16.91■□□□□ 0.3
CBX4-204ENST00000495122 TTMPQ5BVD1 217 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 WSCD1Q658N2 575 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 ANKRD54Q6NXT1 300 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 C4orf22Q6V702 233 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 KDM7AQ6ZMT4 941 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 CYP4V2Q6ZWL3 525 aaPredicted RBP16.91■□□□□ 0.3
CBX4-204ENST00000495122 ANKS1BQ7Z6G8 1248 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 RFX6Q8HWS3 928 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 RNF135Q8IUD6 432 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 FUKQ8N0W3 1084 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 FAM172AQ8WUF8 416 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 BCL7CQ8WUZ0 217 aaPredicted RBP16.91■□□□□ 0.3
CBX4-204ENST00000495122 RIN2Q8WYP3 895 aaPredicted RBP16.91■□□□□ 0.3
CBX4-204ENST00000495122 FAF2Q96CS3 445 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 TMEM169Q96HH4 297 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 SYT15Q9BQS2 421 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 TRIM62Q9BVG3 475 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 KLHL11Q9NVR0 708 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 DDX43Q9NXZ2 648 aaKnown RBP16.91■□□□□ 0.3
CBX4-204ENST00000495122 DNAJB4Q9UDY4 337 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 MUTYHQ9UIF7 546 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 DNPEPQ9ULA0 475 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 INPP5FQ9Y2H2 1132 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 DOCK6Q96HP0 2047 aa16.91■□□□□ 0.3
CBX4-204ENST00000495122 MUC6Q6W4X9 2439 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 C2orf71A6NGG8 1288 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 M0QZQ0 153 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 SHOX2O60902 331 aaPredicted RBP16.9■□□□□ 0.3
CBX4-204ENST00000495122 GALTP07902 379 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 PLA2G5P39877 138 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 MATKP42679 507 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 CDR1P51861 262 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 ITGA8P53708 1063 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 CDH6P55285 790 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 KRT81Q14533 505 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 CBX2Q14781 532 aaPredicted RBP16.9■□□□□ 0.3
CBX4-204ENST00000495122 DPYSL2Q16555 572 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 IZUMO3Q5VZ72 239 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 TRNP1Q6NT89 227 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 HIBCHQ6NVY1 386 aaPredicted RBP16.9■□□□□ 0.3
CBX4-204ENST00000495122 SYCE2Q6PIF2 218 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 ZCCHC9Q8N567 271 aaKnown RBP16.9■□□□□ 0.3
CBX4-204ENST00000495122 MRPL43Q8N983 215 aaKnown RBP16.9■□□□□ 0.3
CBX4-204ENST00000495122 MYCBPAPQ8TBZ2 947 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 PGM2Q96G03 612 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 IGSF21Q96ID5 467 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 TTC25Q96NG3 672 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 RNF157Q96PX1 679 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 ACBD6Q9BR61 282 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 PHF7Q9BWX1 381 aaPredicted RBP16.9■□□□□ 0.3
CBX4-204ENST00000495122 S1PR5Q9H228 398 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 PNPLA8Q9NP80 782 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.9■□□□□ 0.3
CBX4-204ENST00000495122 KANSL3Q9P2N6 904 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 PCSK1NQ9UHG2 260 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 STAP1Q9ULZ2 295 aa16.9■□□□□ 0.3
CBX4-204ENST00000495122 ARIH1Q9Y4X5 557 aaPredicted RBP16.9■□□□□ 0.3
CBX4-204ENST00000495122 TSC2P49815 1807 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 TMEM189-UBE2V1I3L0A0 370 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 TULP2O00295 520 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 RIPK2O43353 540 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 TCEA3O75764 348 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 NOS2P35228 1153 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 SLC11A1P49279 550 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 CLCNKBP51801 687 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 ZNF135P52742 658 aaPredicted RBP16.89■□□□□ 0.29
CBX4-204ENST00000495122 OTUD4Q01804 1114 aaKnown RBP16.89■□□□□ 0.29
CBX4-204ENST00000495122 RNASELQ05823 741 aaKnown RBP16.89■□□□□ 0.29
CBX4-204ENST00000495122 DPYSL3Q14195 570 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 NOMO1Q15155 1222 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 SMTNL2Q2TAL5 461 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 SLC25A52Q3SY17 297 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 C6orf118Q5T5N4 469 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 ERMARDQ5T6L9 678 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 DCLRE1AQ6PJP8 1040 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 PIGZQ86VD9 579 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 SCUBE3Q8IX30 993 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 SIX6OS1Q8N1H7 587 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 ACTL9Q8TC94 416 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 URGCPQ8TCY9 931 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.89■□□□□ 0.29
CBX4-204ENST00000495122 IRGQQ8WZA9 623 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 HSPH1Q92598 858 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 CASP10Q92851 521 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 ARL8AQ96BM9 186 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 HAUS1Q96CS2 278 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 SMARCD1Q96GM5 515 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 PEBP4Q96S96 227 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 VN1R3Q9BXE9 311 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 EPB41L4BQ9H329 900 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 PPCSQ9HAB8 311 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms