RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 WDR75Q8IWA0 830 aaKnown RBP15.86■□□□□ 0.13
SDF4-207ENST00000494748 MCUQ8NE86 351 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 DCUN1D1Q96GG9 259 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 RNF157Q96PX1 679 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 SENP6Q9GZR1 1112 aaPredicted RBP15.86■□□□□ 0.13
SDF4-207ENST00000494748 CYP4F11Q9HBI6 524 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 DNAAF2Q9NVR5 837 aaKnown RBP15.86■□□□□ 0.13
SDF4-207ENST00000494748 LOC285556D6RIA3 1793 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 KCNA4P22459 653 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 MYBPC1Q00872 1141 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 USP41Q3LFD5 358 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 NADK2Q4G0N4 442 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 TMEM130Q8N3G9 435 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 HIPK4Q8NE63 616 aa15.86■□□□□ 0.13
SDF4-207ENST00000494748 EBNA1BP2Q99848 306 aaKnown RBP15.86■□□□□ 0.13
SDF4-207ENST00000494748 LRRIQ4A6NIV6 560 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 PLIN3O60664 434 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 ZMPSTE24O75844 475 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 METTL18O95568 372 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 GRIA1P42261 906 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 RAP1GAPP47736 663 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 ALDH1A3P47895 512 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 HPCAP84074 193 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 PDE1CQ14123 709 aaPredicted RBP15.85■□□□□ 0.13
SDF4-207ENST00000494748 PDPK2PQ6A1A2 396 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 PIP4K2CQ8TBX8 421 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 LRRC39Q96DD0 335 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 NRDE2Q9H7Z3 1164 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 JPH1Q9HDC5 661 aaPredicted RBP15.85■□□□□ 0.13
SDF4-207ENST00000494748 APOBEC2Q9Y235 224 aaKnown RBP15.85■□□□□ 0.13
SDF4-207ENST00000494748 PCDHA11Q9Y5I1 949 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 H7C0C1 242 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 WDR46O15213 610 aaKnown RBP15.85■□□□□ 0.13
SDF4-207ENST00000494748 APRTP07741 180 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 NR3C2P08235 984 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 RPL5P46777 297 aaKnown RBP15.85■□□□□ 0.13
SDF4-207ENST00000494748 ATP5OP48047 213 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 CDH6P55285 790 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 APOFQ13790 326 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 WDR78Q5VTH9 848 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 ILDR2Q71H61 639 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 TMCC1O94876 653 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 POLR2BP30876 1174 aaKnown RBP15.85■□□□□ 0.13
SDF4-207ENST00000494748 SH3BGRP55822 239 aaPredicted RBP15.85■□□□□ 0.13
SDF4-207ENST00000494748 SP4Q02446 784 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 NIPAL4Q0D2K0 466 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 ACAP1Q15027 740 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 MYLK3Q32MK0 819 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.85■□□□□ 0.13
SDF4-207ENST00000494748 N4BP2L1Q5TBK1 243 aaPredicted RBP15.85■□□□□ 0.13
SDF4-207ENST00000494748 ISLR2Q6UXK2 745 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 SEPT12Q8IYM1 358 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 ZFP28Q8NHY6 868 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 PIWIL1Q96J94 861 aaKnown RBP15.85■□□□□ 0.13
SDF4-207ENST00000494748 TWNKQ96RR1 684 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 HMGXB4Q9UGU5 601 aa15.85■□□□□ 0.13
SDF4-207ENST00000494748 BCLAF3A2AJT9 711 aaKnown RBP15.84■□□□□ 0.13
SDF4-207ENST00000494748 CAPNS1P04632 268 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 HOXC6P09630 235 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 SCNN1BP51168 640 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 EMP3P54852 163 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 ORC1Q13415 861 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 BAATQ14032 418 aaPredicted RBP15.84■□□□□ 0.13
SDF4-207ENST00000494748 XKR3Q5GH77 459 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 DEPTORQ8TB45 409 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 DTNAQ9Y4J8 743 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 MAP3K6O95382 1288 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 PCSK6P29122 969 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 PMLP29590 882 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 CCND2P30279 289 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 GMPRP36959 345 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 HARS2P49590 506 aaKnown RBP15.84■□□□□ 0.13
SDF4-207ENST00000494748 AP3M2P53677 418 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 CAPSQ13938 189 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 FAM47CQ5HY64 1035 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 B3GNT6Q6ZMB0 384 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 C10orf107Q8IVU9 208 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 PQLC1Q8N2U9 271 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 ICA1LQ8NDH6 482 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 OXCT2Q9BYC2 517 aaPredicted RBP15.84■□□□□ 0.13
SDF4-207ENST00000494748 TMEM134Q9H6X4 195 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 GMEB1Q9Y692 573 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 ALDH1A2O94788 518 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 CRTAMO95727 393 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 HMGCRP04035 888 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 CDK4P11802 303 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 SERPINB6P35237 376 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 NUMBP49757 651 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 SERPINB9P50453 376 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 ZNF143P52747 638 aaPredicted RBP15.84■□□□□ 0.13
SDF4-207ENST00000494748 SP2Q02086 613 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 STEAP4Q687X5 459 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 XRRA1Q6P2D8 792 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 PAOXQ6QHF9 649 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 ZNF696Q9H7X3 374 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 MTMR10Q9NXD2 777 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 RIMS3Q9UJD0 308 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 G3BP2Q9UN86 482 aaKnown RBP15.84■□□□□ 0.13
SDF4-207ENST00000494748 PSMD13Q9UNM6 376 aa15.84■□□□□ 0.13
SDF4-207ENST00000494748 LZTS1Q9Y250 596 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms