RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 FAM217AQ8IXS0 508 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 CPXM2Q8N436 756 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 DCLK2Q8N568 766 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 NAT16Q8N8M0 369 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 IL17RCQ8NAC3 791 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 CRACR2AQ9BSW2 395 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 DNAJC17Q9NVM6 304 aaKnown RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 HBS1LQ9Y450 684 aaKnown RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 EP300Q09472 2414 aaPredicted RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 DMXL1Q9Y485 3027 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 SLC12A8A0AV02 714 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 ANTXRLA6NF34 631 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 MED7O43513 233 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 LRP3O75074 770 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 GABBR2O75899 941 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 CALCAP01258 141 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 RETP07949 1114 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 LCP1P13796 627 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 SLC9A1P19634 815 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 PON1P27169 355 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 GNA15P30679 374 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 GPD2P43304 727 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 RGS7P49802 495 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 DGKEP52429 567 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 ARID5BQ14865 1188 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 TRIP4Q15650 581 aaPredicted RBP13.78□□□□□ -0.2
ERCC3-209ENST00000494464 CRY1Q16526 586 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 EOGTQ5NDL2 527 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 TPGS1Q6ZTW0 290 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 CEP68Q76N32 757 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 TRMT11Q7Z4G4 463 aaKnown RBP13.78□□□□□ -0.2
ERCC3-209ENST00000494464 RASSF3Q86WH2 238 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 CREBRFQ8IUR6 639 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 KIAA2013Q8IYS2 634 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 ALLCQ8N6M5 410 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 TSTD1Q8NFU3 115 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 RNF139Q8WU17 664 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 SHC3Q92529 594 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 NDRG1Q92597 394 aaKnown RBP13.78□□□□□ -0.2
ERCC3-209ENST00000494464 AGO1Q9UL18 857 aaKnown RBP13.78□□□□□ -0.2
ERCC3-209ENST00000494464 STARD13Q9Y3M8 1113 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 SPAG17Q6Q759 2223 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 PLXND1Q9Y4D7 1925 aa13.78□□□□□ -0.2
ERCC3-209ENST00000494464 DCHS1Q96JQ0 3298 aa13.77□□□□□ -0.2
ERCC3-209ENST00000494464 TBC1D3BA6NDS4 549 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 SART1O43290 800 aaKnown RBP13.77□□□□□ -0.21
ERCC3-209ENST00000494464 KLF8O95600 359 aaPredicted RBP13.77□□□□□ -0.21
ERCC3-209ENST00000494464 LATS1O95835 1130 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 PENKP01210 267 aaPredicted RBP13.77□□□□□ -0.21
ERCC3-209ENST00000494464 HMBSP08397 361 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 SKILP12757 684 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 TIE1P35590 1138 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 TRIM14Q14142 442 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 LPAL2Q16609 132 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 MIIPQ5JXC2 388 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 C10orf76Q5T2E6 689 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 FYB2Q5VWT5 728 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 GJB7Q6PEY0 223 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 FMNL3Q8IVF7 1028 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 CCDC33Q8N5R6 958 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 FAM160A2Q8N612 972 aaPredicted RBP13.77□□□□□ -0.21
ERCC3-209ENST00000494464 TXNDC5Q8NBS9 432 aaKnown RBP13.77□□□□□ -0.21
ERCC3-209ENST00000494464 STK32AQ8WU08 396 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 ZNF606Q8WXB4 792 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 LOXL4Q96JB6 756 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 TUBGCP2Q9BSJ2 902 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 NDST4Q9H3R1 872 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 SIX2Q9NPC8 291 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 FBXO10Q9UK96 956 aa13.77□□□□□ -0.21
ERCC3-209ENST00000494464 WDR87Q6ZQQ6 2873 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 LGALS16A8MUM7 142 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 SGK1O00141 431 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 THAP12O43422 761 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 ADAM23O75077 832 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 IGLV3-27P01718 113 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 LTFP02788 710 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 TGM1P22735 817 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 ACADSBP45954 432 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 HARS2P49590 506 aaKnown RBP13.76□□□□□ -0.21
ERCC3-209ENST00000494464 DGKGP49619 791 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 VWA3BQ502W6 1294 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 TMEM92Q6UXU6 159 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 CACNA2D4Q7Z3S7 1137 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 DENND1CQ8IV53 801 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 ZNF513Q8N8E2 541 aaPredicted RBP13.76□□□□□ -0.21
ERCC3-209ENST00000494464 CLEC4CQ8WTT0 213 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 EDEM1Q92611 657 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 GOLGA1Q92805 767 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 P2RY11Q96G91 374 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 ZC3H10Q96K80 434 aaKnown RBP13.76□□□□□ -0.21
ERCC3-209ENST00000494464 SLC4A5Q9BY07 1137 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 TAB2Q9NYJ8 693 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 STOML2Q9UJZ1 356 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 SLC27A6Q9Y2P4 619 aa13.76□□□□□ -0.21
ERCC3-209ENST00000494464 A0A1W2PQC6 194 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 PIK3R2O00459 728 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 TRIM24O15164 1050 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 TEX33O43247 280 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 ALDH1A2O94788 518 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms