RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PLA2G4AP47712 749 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 NASPP49321 788 aaPredicted RBP13.91□□□□□ -0.18
USF1-206ENST00000491629 BIRC3Q13489 604 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 STARD3Q14849 445 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 KIF19Q2TAC6 998 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 C10orf120Q5SQS8 335 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 C1orf220Q5T0J3 134 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 LAYNQ6UX15 382 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 HNRNPABQ99729 332 aaKnown RBP13.91□□□□□ -0.18
USF1-206ENST00000491629 SLC39A2Q9NP94 309 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.91□□□□□ -0.18
USF1-206ENST00000491629 DMAC2Q9NW81 257 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 DNMT3LQ9UJW3 386 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.91□□□□□ -0.18
USF1-206ENST00000491629 MTMR6Q9Y217 621 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 SNX11Q9Y5W9 270 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 A0A087WV48 116 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 FLRT2O43155 660 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 EXOC3O60645 756 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 C1QL1O75973 258 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 FAM200BP0CF97 657 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 C7P10643 843 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 HLA-EP13747 358 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 OXTRP30559 389 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 ACSL1P33121 698 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 KIF11P52732 1056 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 SNRPFP62306 86 aaKnown RBP13.9□□□□□ -0.18
USF1-206ENST00000491629 SMAD1Q15797 465 aaKnown RBP13.9□□□□□ -0.18
USF1-206ENST00000491629 ERICH6BQ5W0A0 696 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 SHC4Q6S5L8 630 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 UNC13DQ70J99 1090 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 FAM124AQ86V42 546 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 ZNF276Q8N554 614 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 LINC00301Q8NCQ3 95 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 DHX58Q96C10 678 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 ORAI3Q9BRQ5 295 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 NUP58Q9BVL2 599 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 BLZF1Q9H2G9 400 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 ELOVL2Q9NXB9 296 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 USP3Q9Y6I4 520 aa13.9□□□□□ -0.18
USF1-206ENST00000491629 ASS1P00966 412 aaKnown RBP13.89□□□□□ -0.19
USF1-206ENST00000491629 HMBSP08397 361 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 ZNF132P52740 706 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 GOLGA8FQ08AF8 430 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 GOLGA8DPQ0D2H9 430 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 KNOP1Q1ED39 458 aaKnown RBP13.89□□□□□ -0.19
USF1-206ENST00000491629 ZACNQ401N2 412 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 IL27RAQ6UWB1 636 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 UNC93AQ86WB7 457 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 SCUBE3Q8IX30 993 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 PRCCQ92733 491 aaPredicted RBP13.89□□□□□ -0.19
USF1-206ENST00000491629 CYFIP2Q96F07 1278 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 CDC6Q99741 560 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 APOBEC3GQ9HC16 384 aaKnown RBP13.89□□□□□ -0.19
USF1-206ENST00000491629 NAGPAQ9UK23 515 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 AGO1Q9UL18 857 aaKnown RBP13.89□□□□□ -0.19
USF1-206ENST00000491629 ANKRD6Q9Y2G4 727 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.89□□□□□ -0.19
USF1-206ENST00000491629 PCDHA5Q9Y5H7 936 aa13.89□□□□□ -0.19
USF1-206ENST00000491629 H0Y8X5 98 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 NPC1O15118 1278 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 EPHX1P07099 455 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 CORO1AP31146 461 aaKnown RBP13.88□□□□□ -0.19
USF1-206ENST00000491629 CLDN6P56747 220 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 INCA1Q0VD86 236 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 CUL4BQ13620 913 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 SGSM1Q2NKQ1 1148 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 SV2AQ7L0J3 742 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 ANKS1BQ7Z6G8 1248 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 FAM217AQ8IXS0 508 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
USF1-206ENST00000491629 ZNF366Q8N895 744 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 LRRC27Q9C0I9 530 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 CUEDC2Q9H467 287 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 TM9SF3Q9HD45 589 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 PNPLA8Q9NP80 782 aa13.88□□□□□ -0.19
USF1-206ENST00000491629 CGNQ9P2M7 1197 aaKnown RBP13.88□□□□□ -0.19
USF1-206ENST00000491629 TFIP11Q9UBB9 837 aaKnown RBP13.88□□□□□ -0.19
USF1-206ENST00000491629 TNFSF14O43557 240 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 KLRC4O43908 158 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 SYNCRIPO60506 623 aaKnown RBP13.87□□□□□ -0.19
USF1-206ENST00000491629 HLA-DRAP01903 254 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 PDCP20941 246 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 ITPKBP27987 946 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 AFF3P51826 1226 aaKnown RBP13.87□□□□□ -0.19
USF1-206ENST00000491629 AP3M2P53677 418 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 EFEMP1Q12805 493 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 CAMK2GQ13555 558 aaPredicted RBP13.87□□□□□ -0.19
USF1-206ENST00000491629 DHRS13Q6UX07 377 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 DENND1CQ8IV53 801 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 GRAMD1CQ8IYS0 662 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 SNX19Q92543 992 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 COL26A1Q96A83 441 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 BIRC7Q96CA5 298 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 TMEM245Q9H330 911 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 RASAL2Q9UJF2 1139 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 ZNF510Q9Y2H8 683 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 NAV2Q8IVL1 2488 aa13.87□□□□□ -0.19
USF1-206ENST00000491629 TDRD6O60522 2096 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms