RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 DIP2BQ9P265 1576 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF532Q9HCE3 1301 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CHD4Q14839 1912 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 FAM208AQ9UK61 1670 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 PRAMEF33A0A0G2JMD5 474 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 BICDL2A1A5D9 508 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 LRRC3CA6NJW4 275 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 SRRM3A6NNA2 597 aaPredicted RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 EIF3CLB5ME19 914 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 KIF28PB7ZC32 967 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 EXOC5O00471 708 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 PSMD14O00487 310 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 EBAG9O00559 213 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 PRAMEF10O60809 474 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 IPO7O95373 1038 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 AMY1AP04745 511 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 LDHCP07864 332 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 FAM163BP0C2L3 166 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 EBLN1P0CF75 366 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC5A1P13866 664 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 KCNA2P16389 499 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CAPN2P17655 700 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 AGXTP21549 392 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 FGFR2P21802 821 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 GATA3P23771 443 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 EEF1GP26641 437 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 OAS2P29728 719 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CASP14P31944 242 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 KIF5BP33176 963 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 KRT9P35527 623 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CYLC1P35663 651 aaPredicted RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 KRT2P35908 639 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 LONP1P36776 959 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 PAFAH1B1P43034 410 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 GUCY2FP51841 1108 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 COPB1P53618 953 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF280AP59817 542 aaPredicted RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CTXN1P60606 82 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 UBXN1Q04323 297 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CKAP4Q07065 602 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 MGAT2Q10469 447 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 KIF5AQ12840 1032 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CUL4BQ13620 913 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 IL10RAQ13651 578 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 UBE4AQ14139 1066 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 PDIA5Q14554 519 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 KCNB1Q14721 858 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CASP8Q14790 479 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 SPA17Q15506 151 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 PTPN21Q16825 1174 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 KHDC1Q4VXA5 237 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 SBK1Q52WX2 424 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 TCP11X2Q5H9J9 407 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 PLAC9Q5JTB6 97 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC10A5Q5PT55 438 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 C10orf76Q5T2E6 689 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 RRAGBQ5VZM2 374 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 METRNLQ641Q3 311 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 KIF6Q6ZMV9 814 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 GBP6Q6ZN66 633 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 SEM1Q6ZVN7 128 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 APTXQ7Z2E3 356 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CATIPQ7Z7H3 387 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 DGKHQ86XP1 1220 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 FAM114A1Q8IWE2 563 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 DIS3L2Q8IYB7 885 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF34Q8IZ26 560 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 MIER2Q8N344 545 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 MMGT1Q8N4V1 131 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CAMKK1Q8N5S9 505 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 EIF1ADQ8N9N8 165 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 SPATA5Q8NB90 893 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 STAG1Q8WVM7 1258 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 PPM1EQ8WY54 764 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 DDB2Q92466 427 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 RUBCNQ92622 972 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 PHKBQ93100 1093 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 FAXDC2Q96IV6 333 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 AK8Q96MA6 479 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 WDR24Q96S15 920 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 NUP88Q99567 741 aaPredicted RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 EIF3CQ99613 913 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 NAPGQ99747 312 aaPredicted RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 LZTS2Q9BRK4 669 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 TLR10Q9BXR5 811 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 FTOQ9C0B1 505 aaKnown RBP eCLIP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 VPS16Q9H269 839 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 CUEDC2Q9H467 287 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 THAP9Q9H5L6 903 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 ANKZF1Q9H8Y5 726 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 LZTFL1Q9NQ48 299 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 ATP8A2Q9NTI2 1148 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 GJB4Q9NTQ9 266 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 HSFX1Q9UBD0 423 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 FEZ2Q9UHY8 353 aaPredicted RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 TRMT112Q9UI30 125 aaKnown RBP2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 GGA2Q9UJY4 613 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 NEU2Q9Y3R4 380 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 JRKLQ9Y4A0 524 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms