RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 IFIT2P09913 472 aaKnown RBP4.81□□□□□ -1.64
LINC00888-204ENST00000487386 SRGAP2BP0DMP2 458 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 MATN1P21941 496 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 THBS4P35443 961 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 PPM1AP35813 382 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 IGHMBP2P38935 993 aaKnown RBP4.81□□□□□ -1.64
LINC00888-204ENST00000487386 ARHGAP25P42331 645 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 HTR3AP46098 478 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 ZNF81P51508 661 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 GAB1Q13480 694 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 BFSP2Q13515 415 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 MSANTD2Q6P1R3 559 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 SLC2A7Q6PXP3 512 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 TOGARAM2Q6ZUX3 1019 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 RASGRP3Q8IV61 690 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 OSR1Q8TAX0 266 aaPredicted RBP4.81□□□□□ -1.64
LINC00888-204ENST00000487386 TMEM41AQ96HV5 264 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 PAAF1Q9BRP4 392 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 NUAK2Q9H093 628 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 AGO4Q9HCK5 861 aaKnown RBP4.81□□□□□ -1.64
LINC00888-204ENST00000487386 KCNU1A8MYU2 1149 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 J3KTA2 159 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 PRYO14603 147 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 RRHO14718 337 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 RNF8O76064 485 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 TOP3BO95985 862 aaKnown RBP4.8□□□□□ -1.64
LINC00888-204ENST00000487386 IL6STP40189 918 aaPredicted RBP4.8□□□□□ -1.64
LINC00888-204ENST00000487386 GSTM5P46439 218 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 CFHR1Q03591 330 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 KLF9Q13886 244 aaPredicted RBP4.8□□□□□ -1.64
LINC00888-204ENST00000487386 UBE4AQ14139 1066 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 PFKFB3Q16875 520 aaPredicted RBP4.8□□□□□ -1.64
LINC00888-204ENST00000487386 TRIM71Q2Q1W2 868 aaKnown RBP4.8□□□□□ -1.64
LINC00888-204ENST00000487386 CC2D1BQ5T0F9 858 aaKnown RBP4.8□□□□□ -1.64
LINC00888-204ENST00000487386 KYAT3Q6YP21 454 aaKnown RBP4.8□□□□□ -1.64
LINC00888-204ENST00000487386 UBE2Q1Q7Z7E8 422 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 SYTL1Q8IYJ3 562 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 OR52L2PQ8NGH6 319 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 IPO4Q8TEX9 1081 aaKnown RBP4.8□□□□□ -1.64
LINC00888-204ENST00000487386 GLMPQ8WWB7 406 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 RPL36ALQ969Q0 106 aaKnown RBP4.8□□□□□ -1.64
LINC00888-204ENST00000487386 SLC29A3Q9BZD2 475 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 MLXIPLQ9NP71 852 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 VPS4AQ9UN37 437 aa4.8□□□□□ -1.64
LINC00888-204ENST00000487386 PNMA6EA0A0J9YXQ4 647 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 CCDC194A0A1B0GVG4 234 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 NPC1O15118 1278 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 ANXA6P08133 673 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 ITGA5P08648 1049 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 ALADP13716 330 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 NPPBP16860 134 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 HOXD12P35452 270 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 IDUAP35475 653 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 ZNF84P51523 738 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 GHRHRQ02643 423 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 KPNB1Q14974 876 aaKnown RBP4.79□□□□□ -1.64
LINC00888-204ENST00000487386 TRIP6Q15654 476 aaKnown RBP4.79□□□□□ -1.64
LINC00888-204ENST00000487386 ELF2Q15723 593 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 CNGA3Q16281 694 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 PAPD7Q5XG87 772 aaKnown RBP4.79□□□□□ -1.64
LINC00888-204ENST00000487386 DEF8Q6ZN54 512 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 TFAP2DQ7Z6R9 452 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 MORC1Q86VD1 984 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 ACRBPQ8NEB7 543 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 COQ8BQ96D53 544 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 SIGLEC11Q96RL6 698 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 TM2D2Q9BX73 214 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 WDR12Q9GZL7 423 aaKnown RBP4.79□□□□□ -1.64
LINC00888-204ENST00000487386 CDCP1Q9H5V8 836 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 KCNK9Q9NPC2 374 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 SLC52A1Q9NWF4 448 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 CDC23Q9UJX2 597 aa4.79□□□□□ -1.64
LINC00888-204ENST00000487386 SIRT4Q9Y6E7 314 aaPredicted RBP4.79□□□□□ -1.64
LINC00888-204ENST00000487386 GOLGA6L3A6NEY3 463 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 PIP5K1BO14986 540 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 MOSPD3O75425 235 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 TACR3P29371 465 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 TECP42680 631 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 YPEL5P62699 121 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 HSF1Q00613 529 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 HDAC1Q13547 482 aaPredicted RBP4.78□□□□□ -1.64
LINC00888-204ENST00000487386 CSHL1Q14406 222 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 GRM4Q14833 912 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 FAM110CQ1W6H9 321 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 Q4G0T1 1027 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 ANO7Q6IWH7 933 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 C16orf89Q6UX73 402 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 NOL8Q76FK4 1167 aaKnown RBP4.78□□□□□ -1.64
LINC00888-204ENST00000487386 CNGA4Q8IV77 575 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 LAS2Q8IYD9 372 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 C16orf71Q8IYS4 520 aaPredicted RBP4.78□□□□□ -1.64
LINC00888-204ENST00000487386 WIPF2Q8TF74 440 aaPredicted RBP4.78□□□□□ -1.64
LINC00888-204ENST00000487386 AKAP1Q92667 903 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC00888-204ENST00000487386 MUL1Q969V5 352 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 ZNF845Q96IR2 970 aaPredicted RBP4.78□□□□□ -1.64
LINC00888-204ENST00000487386 TMEM79Q9BSE2 394 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 ARFGAP3Q9NP61 516 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 RNF7Q9UBF6 113 aa4.78□□□□□ -1.64
LINC00888-204ENST00000487386 HEMK1Q9Y5R4 338 aaPredicted RBP4.78□□□□□ -1.64
LINC00888-204ENST00000487386 SPATA31A5Q5VU36 1347 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms