RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 KAT5Q92993 513 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 PLD4Q96BZ4 506 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 GBP4Q96PP9 640 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 TUBGCP2Q9BSJ2 902 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 SLC2A11Q9BYW1 496 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 NUP62CLQ9H1M0 184 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 LHX5Q9H2C1 402 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 NDST4Q9H3R1 872 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 ARHGEF4Q9NR80 690 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 TMEM51Q9NW97 253 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 MARCH2Q9P0N8 246 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 RAB23Q9ULC3 237 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 PCDHGC3Q9UN70 934 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 SMG5Q9UPR3 1016 aaKnown RBP7.33□□□□□ -1.24
VPS50-218ENST00000485994 NUP205Q92621 2012 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 THADAQ6YHU6 1953 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 PLXND1Q9Y4D7 1925 aa7.33□□□□□ -1.24
VPS50-218ENST00000485994 CACNA1AO00555 2505 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 KNL1Q8NG31 2342 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 YJEFN3A6XGL0 299 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 E7ENQ6 273 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 AXIN1O15169 862 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 TIMM44O43615 452 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 APBB3O95704 486 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 S1PR4O95977 384 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 IGLV3-27P01718 113 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 LTFP02788 710 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 GLI1P08151 1106 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 TYRP14679 529 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 EEF1GP26641 437 aaKnown RBP7.32□□□□□ -1.24
VPS50-218ENST00000485994 MTIF2P46199 727 aaKnown RBP7.32□□□□□ -1.24
VPS50-218ENST00000485994 BPIFB4P59827 614 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 FOXK2Q01167 660 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 DMWDQ09019 674 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 MESP2Q0VG99 397 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 EFEMP1Q12805 493 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 EIF4EBP2Q13542 120 aaPredicted RBP7.32□□□□□ -1.24
VPS50-218ENST00000485994 ENPP2Q13822 863 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 TPD52L1Q16890 204 aaPredicted RBP7.32□□□□□ -1.24
VPS50-218ENST00000485994 ANO4Q32M45 955 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 MIIPQ5JXC2 388 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 SPDYCQ5MJ68 293 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 EOGTQ5NDL2 527 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 PLA2G2CQ5R387 149 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 FYB2Q5VWT5 728 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 KIAA0907Q7Z7F0 614 aaPredicted RBP7.32□□□□□ -1.24
VPS50-218ENST00000485994 UNC45BQ8IWX7 931 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 TERB1Q8NA31 727 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 TTC16Q8NEE8 873 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 OLIG1Q8TAK6 271 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 RNF139Q8WU17 664 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 PIWIL1Q96J94 861 aaKnown RBP7.32□□□□□ -1.24
VPS50-218ENST00000485994 TRIM62Q9BVG3 475 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 TMUB1Q9BVT8 246 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 BBS2Q9BXC9 721 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 POLMQ9NP87 494 aaPredicted RBP7.32□□□□□ -1.24
VPS50-218ENST00000485994 DLL3Q9NYJ7 618 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 APEX2Q9UBZ4 518 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 GMEB2Q9UKD1 530 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 NUDT5Q9UKK9 219 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 AGO1Q9UL18 857 aaKnown RBP7.32□□□□□ -1.24
VPS50-218ENST00000485994 DAAM1Q9Y4D1 1078 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 PCDHGA5Q9Y5G8 931 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 DCHS1Q96JQ0 3298 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 DMXL1Q9Y485 3027 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 CACNA1EQ15878 2313 aa7.32□□□□□ -1.24
VPS50-218ENST00000485994 SLC12A8A0AV02 714 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 BECN2A8MW95 431 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 GOLGA6L22H0YM25 854 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 FOXN3O00409 490 aaPredicted RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 MDM4O15151 490 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 IRAK2O43187 625 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 GDF9O60383 454 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 RPP40O75818 363 aaKnown RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 ALDH1A2O94788 518 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 RHOBTB1O94844 696 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 FYNP06241 537 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 IRF1P10914 325 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 BRD2P25440 801 aaKnown RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 NTSR1P30989 418 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 CORO1AP31146 461 aaKnown RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 HARS2P49590 506 aaKnown RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 DGKGP49619 791 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 SNX16P57768 344 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 PTK2Q05397 1052 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 ADIGQ0VDE8 80 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 KCNMA1Q12791 1236 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 BYSLQ13895 437 aaKnown RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 CSRP2Q16527 193 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 DPCR1Q3MIW9 517 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 VWA3BQ502W6 1294 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 MPPE1Q53F39 396 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 USP39Q53GS9 565 aaKnown RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 C2orf27AQ580R0 203 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 ADGRF1Q5T601 910 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 EMC10Q5UCC4 262 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 GRAMD4Q6IC98 578 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 RSRC2Q7L4I2 434 aaKnown RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 METTL3Q86U44 580 aaKnown RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 MIB1Q86YT6 1006 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms